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  5. Smo165523

Smo165523


Description : Protein translocation.nucleus.nucleocytoplasmic transport.RanBP1 GTPase activation accessory protein


Gene families : OG0001732 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001732_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo165523
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AT2G30060 No alias Pleckstrin homology (PH) domain superfamily protein 0.02 OrthoFinder output from all 47 species
Aop_g05870 No alias Ran-activation accessory protein *(RanBP1) & original... 0.04 OrthoFinder output from all 47 species
Cba_g12282 RANBP1 Ran-activation accessory protein *(RanBP1) & original... 0.02 OrthoFinder output from all 47 species
Cba_g23036 No alias Ran-activation accessory protein *(RanBP1) & original... 0.02 OrthoFinder output from all 47 species
Ceric.30G048500.1 Ceric.30G048500 Ran-activation accessory protein *(RanBP1) & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021612.44 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre09.g394450 RANBP1 Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder output from all 47 species
Dac_g08112 RANBP1 Ran-activation accessory protein *(RanBP1) & original... 0.03 OrthoFinder output from all 47 species
MA_31505g0010 RANBP1 GTPase activation accessory protein (RanBP1) 0.02 OrthoFinder output from all 47 species
Spa_g46213 RANBP1 Ran-activation accessory protein *(RanBP1) & original... 0.02 OrthoFinder output from all 47 species
Tin_g11884 RANBP1 Ran-activation accessory protein *(RanBP1) & original... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0046907 intracellular transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000156 Ran_bind_dom 41 155
No external refs found!