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  5. Smo165451

Smo165451


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.PES-BOP1-WDR12 (PeBoW) complex.BOP1 component


Gene families : OG0005027 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005027_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo165451
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00239810 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
AT2G40360 No alias Transducin/WD40 repeat-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g024474 No alias component *(BOP1) of ribosome PES-BOP1-WDR12 (PeBoW)... 0.04 OrthoFinder output from all 47 species
Aev_g42428 No alias component *(BOP1) of ribosome PES-BOP1-WDR12 (PeBoW)... 0.02 OrthoFinder output from all 47 species
Aob_g12692 No alias component *(BOP1) of ribosome PES-BOP1-WDR12 (PeBoW)... 0.02 OrthoFinder output from all 47 species
Azfi_s0280.g062281 No alias component *(BOP1) of ribosome PES-BOP1-WDR12 (PeBoW)... 0.06 OrthoFinder output from all 47 species
Ceric.28G059200.1 Ceric.28G059200 component *(BOP1) of ribosome PES-BOP1-WDR12 (PeBoW)... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000382.38 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 OrthoFinder output from all 47 species
Cre10.g417950 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
Dcu_g10502 No alias component *(BOP1) of ribosome PES-BOP1-WDR12 (PeBoW)... 0.05 OrthoFinder output from all 47 species
Dde_g04427 No alias component *(BOP1) of ribosome PES-BOP1-WDR12 (PeBoW)... 0.04 OrthoFinder output from all 47 species
Ehy_g04956 No alias component *(BOP1) of ribosome PES-BOP1-WDR12 (PeBoW)... 0.02 OrthoFinder output from all 47 species
GSVIVT01004116001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
LOC_Os07g25440.1 LOC_Os07g25440 component BOP1 of ribosome PES-BOP1-WDR12 (PeBoW) complex 0.04 OrthoFinder output from all 47 species
Mp2g26050.1 No alias component BOP1 of ribosome PES-BOP1-WDR12 (PeBoW) complex 0.05 OrthoFinder output from all 47 species
Pp3c18_14790V3.1 Pp3c18_14790 Transducin/WD40 repeat-like superfamily protein 0.02 OrthoFinder output from all 47 species
Ppi_g17370 No alias component *(BOP1) of ribosome PES-BOP1-WDR12 (PeBoW)... 0.02 OrthoFinder output from all 47 species
Solyc01g103720.4.1 Solyc01g103720 component BOP1 of ribosome PES-BOP1-WDR12 (PeBoW) complex 0.06 OrthoFinder output from all 47 species
Zm00001e017600_P002 Zm00001e017600 component BOP1 of ribosome PES-BOP1-WDR12 (PeBoW) complex 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP HCCA
BP GO:0000278 mitotic cell cycle IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0007088 regulation of mitotic nuclear division IEP HCCA
BP GO:0007093 mitotic cell cycle checkpoint signaling IEP HCCA
BP GO:0007094 mitotic spindle assembly checkpoint signaling IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
BP GO:0010948 negative regulation of cell cycle process IEP HCCA
BP GO:0010965 regulation of mitotic sister chromatid separation IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP HCCA
BP GO:0031577 spindle checkpoint signaling IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
BP GO:0033045 regulation of sister chromatid segregation IEP HCCA
BP GO:0033046 negative regulation of sister chromatid segregation IEP HCCA
BP GO:0033047 regulation of mitotic sister chromatid segregation IEP HCCA
BP GO:0033048 negative regulation of mitotic sister chromatid segregation IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0045786 negative regulation of cell cycle IEP HCCA
BP GO:0045839 negative regulation of mitotic nuclear division IEP HCCA
BP GO:0045841 negative regulation of mitotic metaphase/anaphase transition IEP HCCA
BP GO:0045930 negative regulation of mitotic cell cycle IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0051783 regulation of nuclear division IEP HCCA
BP GO:0051784 negative regulation of nuclear division IEP HCCA
BP GO:0051983 regulation of chromosome segregation IEP HCCA
BP GO:0051985 negative regulation of chromosome segregation IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071173 spindle assembly checkpoint signaling IEP HCCA
BP GO:0071174 mitotic spindle checkpoint signaling IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901988 negative regulation of cell cycle phase transition IEP HCCA
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1901991 negative regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP HCCA
BP GO:1902100 negative regulation of metaphase/anaphase transition of cell cycle IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
BP GO:1905818 regulation of chromosome separation IEP HCCA
BP GO:1905819 negative regulation of chromosome separation IEP HCCA
BP GO:2000816 negative regulation of mitotic sister chromatid separation IEP HCCA
BP GO:2001251 negative regulation of chromosome organization IEP HCCA
InterPro domains Description Start Stop
IPR012953 BOP1_N_dom 130 386
No external refs found!