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  5. Smo158694

Smo158694


Description : Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT5 epsilon subunit


Gene families : OG0005131 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005131_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo158694

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00173980 evm_27.TU.AmTr_v1... Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.1 OrthoFinder output from all 47 species
AT1G24510 No alias TCP-1/cpn60 chaperonin family protein 0.06 OrthoFinder output from all 47 species
Aop_g02559 No alias subunit epsilon *(CCT5) of CCT chaperonin folding... 0.05 OrthoFinder output from all 47 species
Azfi_s0390.g067696 No alias subunit epsilon *(CCT5) of CCT chaperonin folding... 0.07 OrthoFinder output from all 47 species
Ceric.01G023200.1 Ceric.01G023200 subunit epsilon *(CCT5) of CCT chaperonin folding... 0.05 OrthoFinder output from all 47 species
Ceric.01G032800.1 Ceric.01G032800 subunit epsilon *(CCT5) of CCT chaperonin folding... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000571.47 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.02 OrthoFinder output from all 47 species
Cre03.g156750 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.05 OrthoFinder output from all 47 species
Dac_g03337 No alias subunit epsilon *(CCT5) of CCT chaperonin folding... 0.02 OrthoFinder output from all 47 species
Dcu_g05555 No alias subunit epsilon *(CCT5) of CCT chaperonin folding... 0.06 OrthoFinder output from all 47 species
GSVIVT01000590001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.02 OrthoFinder output from all 47 species
GSVIVT01020856001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.07 OrthoFinder output from all 47 species
Gb_12826 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.03 OrthoFinder output from all 47 species
Gb_40545 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.04 OrthoFinder output from all 47 species
LOC_Os06g36700.1 LOC_Os06g36700 CCT5 subunit epsilon of CCT chaperonin folding complex 0.09 OrthoFinder output from all 47 species
Len_g15605 No alias subunit epsilon *(CCT5) of CCT chaperonin folding... 0.02 OrthoFinder output from all 47 species
Lfl_g19360 No alias subunit epsilon *(CCT5) of CCT chaperonin folding... 0.05 OrthoFinder output from all 47 species
MA_10435597g0010 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.04 OrthoFinder output from all 47 species
Mp7g17510.1 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.06 OrthoFinder output from all 47 species
Ore_g09320 No alias subunit epsilon *(CCT5) of CCT chaperonin folding... 0.04 OrthoFinder output from all 47 species
Pp3c20_23570V3.1 Pp3c20_23570 TCP-1/cpn60 chaperonin family protein 0.03 OrthoFinder output from all 47 species
Solyc05g013990.3.1 Solyc05g013990 CCT5 subunit epsilon of CCT chaperonin folding complex 0.06 OrthoFinder output from all 47 species
Spa_g12182 No alias subunit epsilon *(CCT5) of CCT chaperonin folding... 0.06 OrthoFinder output from all 47 species
Zm00001e011557_P001 Zm00001e011557 CCT5 subunit epsilon of CCT chaperonin folding complex 0.05 OrthoFinder output from all 47 species
Zm00001e032727_P001 Zm00001e032727 CCT5 subunit epsilon of CCT chaperonin folding complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004055 argininosuccinate synthase activity IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 40 531
No external refs found!