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  5. Smo137825

Smo137825 (RPL2.1)


Aliases : RPL2.1

Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL2 component


Gene families : OG0002194 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002194_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo137825
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
ATCG00830 RPL2.1 ribosomal protein L2 0.18 OrthoFinder output from all 47 species
ATCG01310 RPL2.2 ribosomal protein L2 0.18 OrthoFinder output from all 47 species
Aev_g14432 RPL2.1 component *(uL2c) of large plastid ribosomal-subunit... 0.22 OrthoFinder output from all 47 species
Aev_g24286 No alias component *(uL2m) of large mitoribosomal-subunit... 0.19 OrthoFinder output from all 47 species
Ala_g18429 RPL2.1 component *(uL2c) of large plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Ala_g38158 No alias component *(uL2m) of large mitoribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Als_g02244 RPL2.1 component *(uL2c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Als_g02447 No alias component *(uL2m) of large mitoribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Aop_g61267 No alias component *(uL2m) of large mitoribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Cba_g03784 No alias component *(uL2m) of large mitoribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Cba_g04596 RPL2.1 component *(uL2c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ceric.05G042700.1 RPL2.1, Ceric.05G042700 not classified & original description: pacid=50577724... 0.08 OrthoFinder output from all 47 species
Ceric.05G048500.1 RPL2.1, Ceric.05G048500 component *(uL2c) of large plastid ribosomal-subunit... 0.1 OrthoFinder output from all 47 species
Ceric.07G017400.1 RPL2.1, Ceric.07G017400 not classified & original description: pacid=50626616... 0.13 OrthoFinder output from all 47 species
Ceric.1Z020200.1 RPL2.1, Ceric.1Z020200 not classified & original description: pacid=50586367... 0.06 OrthoFinder output from all 47 species
Ceric.1Z164200.1 RPL2.1, Ceric.1Z164200 not classified & original description: pacid=50596959... 0.09 OrthoFinder output from all 47 species
Ceric.38G009500.1 RPL2.1, Ceric.38G009500 not classified & original description: pacid=50580350... 0.08 OrthoFinder output from all 47 species
Ceric.38G057600.1 Ceric.38G057600 not classified & original description: pacid=50579815... 0.09 OrthoFinder output from all 47 species
Cre07.g348850 RPL2.1 50S ribosomal protein L2, chloroplastic OS=Chara vulgaris 0.02 OrthoFinder output from all 47 species
Dde_g06655 RPL2.1 component *(uL2c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Dde_g21793 RPL2 not classified & original description: none 0.11 OrthoFinder output from all 47 species
GSVIVT01023979001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_17475 RPL2.1 50S ribosomal protein L2, chloroplastic OS=Cycas... 0.03 OrthoFinder output from all 47 species
Gb_24024 RPL2.1 50S ribosomal protein L2, chloroplastic OS=Cycas... 0.03 OrthoFinder output from all 47 species
Gb_25047 RPL2.1 50S ribosomal protein L2, chloroplastic OS=Cycas... 0.03 OrthoFinder output from all 47 species
Gb_37512 RPL2.1 50S ribosomal protein L2, chloroplastic OS=Cycas... 0.02 OrthoFinder output from all 47 species
Len_g13282 No alias component *(uL2m) of large mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Lfl_g13189 RPL2.1 component *(uL2c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
MA_7814449g0010 No alias 60S ribosomal protein L2, mitochondrial OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Mp1g19370.1 No alias no hits & (original description: none) 0.16 OrthoFinder output from all 47 species
Msp_g00265 No alias component *(uL2m) of large mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Nbi_g04996 RPL2.1 component *(uL2c) of large plastid ribosomal-subunit... 0.15 OrthoFinder output from all 47 species
Nbi_g39693 No alias component *(uL2m) of large mitoribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Ore_g43250 RPL2.1 component *(uL2c) of large plastid ribosomal-subunit... 0.2 OrthoFinder output from all 47 species
Pir_g37334 No alias component *(uL2m) of large mitoribosomal-subunit... 0.14 OrthoFinder output from all 47 species
Pp3c2_23491V3.1 Pp3c2_23491 Ribosomal protein L2 family 0.02 OrthoFinder output from all 47 species
Solyc00g500035.1.1 RPL2.1, Solyc00g500035 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.03 OrthoFinder output from all 47 species
Solyc00g500079.1.1 RPL2.1, Solyc00g500079 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.03 OrthoFinder output from all 47 species
Solyc00g500297.1.1 RPL2.1, Solyc00g500297 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.03 OrthoFinder output from all 47 species
Solyc09g050067.1.1 RPL2.1, Solyc09g050067 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.03 OrthoFinder output from all 47 species
Solyc10g012217.1.1 RPL2.1, Solyc10g012217 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.03 OrthoFinder output from all 47 species
Zm00001e036845_P001 RPL2.1, Zm00001e036845 50S ribosomal protein L2, chloroplastic OS=Sorghum... 0.03 OrthoFinder output from all 47 species
Zm00001e042370_P001 RPL2.1, Zm00001e042370 50S ribosomal protein L2, chloroplastic OS=Sorghum... 0.03 OrthoFinder output from all 47 species
Zm00001e042445_P001 RPL2.1, Zm00001e042445 50S ribosomal protein L2, chloroplastic OS=Sorghum... 0.02 OrthoFinder output from all 47 species
Zm00001e042446_P001 RPL2.1, Zm00001e042446 50S ribosomal protein L2, chloroplastic OS=Sorghum... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0031361 obsolete integral component of thylakoid membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR022666 Rbsml_prot_L2_RNA-bd_dom 43 118
No external refs found!