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  5. Smo107819

Smo107819


Description : Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana


Gene families : OG0000596 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000596_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo107819

Target Alias Description ECC score Gene Family Method Actions
Adi_g003355 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g015683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g30806 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g48359 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g24364 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g49980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01036253001 No alias Pentatricopeptide repeat-containing protein At1g12620... 0.01 OrthoFinder output from all 47 species
Len_g14840 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_7256709g0010 No alias Pentatricopeptide repeat-containing protein At1g05670,... 0.01 OrthoFinder output from all 47 species
Msp_g11830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 158 207
No external refs found!