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  5. Smo104974

Smo104974 (ATMC1, LOL3, MCP1B,...)


Aliases : ATMC1, LOL3, MCP1B, MC1, ATMCPB1

Description : Multi-process regulation.programmed cell death.MCP1 metacaspase-like regulator


Gene families : OG0001440 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001440_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo104974

Target Alias Description ECC score Gene Family Method Actions
Dac_g29137 ATMC1, LOL3,... programmed cell death metacaspase-like regulator *(MCP1)... 0.03 OrthoFinder output from all 47 species
GSVIVT01013843001 ATMC1, LOL3,... Multi-process regulation.programmed cell death.MCP1... 0.02 OrthoFinder output from all 47 species
GSVIVT01015724001 ATMC1, LOL3,... Multi-process regulation.programmed cell death.MCP1... 0.03 OrthoFinder output from all 47 species
LOC_Os03g27120.1 ATMC1, LOL3,... MCP1 programmed cell death metacaspase-like regulator 0.02 OrthoFinder output from all 47 species
MA_61045g0010 ATMC1, LOL3,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_9247617g0010 ATMC1, LOL3,... MCP1 programmed cell death metacaspase-like regulator 0.02 OrthoFinder output from all 47 species
Solyc05g052130.3.1 ATMC1, LOL3,... MCP1 programmed cell death metacaspase-like regulator 0.03 OrthoFinder output from all 47 species
Zm00001e002382_P001 ATMC1, LOL3,... MCP1 programmed cell death metacaspase-like regulator 0.03 OrthoFinder output from all 47 species
Zm00001e037833_P003 ATMC1, LOL3,... MCP1 programmed cell death metacaspase-like regulator 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR005735 Znf_LSD1 5 29
No external refs found!