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  5. LOC_Os12g43630.1

LOC_Os12g43630.1 (PMDH1, LOC_Os12g43630)


Aliases : PMDH1, LOC_Os12g43630

Description : peroxisomal NAD-dependent malate dehydrogenase


Gene families : OG0000664 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000664_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g43630.1

Target Alias Description ECC score Gene Family Method Actions
AT1G53240 mMDH1 Lactate/malate dehydrogenase family protein 0.02 OrthoFinder output from all 47 species
AT2G22780 PMDH1 peroxisomal NAD-malate dehydrogenase 1 0.04 OrthoFinder output from all 47 species
Aob_g16224 MDH malate dehydrogenase component of AAA-ATPase motor... 0.02 OrthoFinder output from all 47 species
Aspi01Gene00466.t1 mMDH1, Aspi01Gene00466 peroxisomal NAD-dependent malate dehydrogenase &... 0.03 OrthoFinder output from all 47 species
Cba_g03815 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.02 OrthoFinder output from all 47 species
Ceric.01G076800.1 PMDH1, Ceric.01G076800 peroxisomal NAD-dependent malate dehydrogenase &... 0.05 OrthoFinder output from all 47 species
Ceric.01G077000.1 PMDH1, Ceric.01G077000 peroxisomal NAD-dependent malate dehydrogenase &... 0.04 OrthoFinder output from all 47 species
Cre03.g194850 MDH Malate dehydrogenase, chloroplastic OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Cre10.g423250 PMDH1 Malate dehydrogenase, glyoxysomal OS=Oryza sativa subsp. japonica 0.09 OrthoFinder output from all 47 species
Gb_04596 MDH malate dehydrogenase component of AAA-ATPase motor complex 0.02 OrthoFinder output from all 47 species
Gb_41721 PMDH1 peroxisomal NAD-dependent malate dehydrogenase 0.03 OrthoFinder output from all 47 species
Len_g02228 MDH malate dehydrogenase component of AAA-ATPase motor... 0.02 OrthoFinder output from all 47 species
Len_g19337 mMDH1 mitochondrial NAD-dependent malate dehydrogenase &... 0.02 OrthoFinder output from all 47 species
Nbi_g02758 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.01 OrthoFinder output from all 47 species
Sam_g39519 No alias peroxisomal NAD-dependent malate dehydrogenase &... 0.02 OrthoFinder output from all 47 species
Solyc02g063490.3.1 PMDH1, Solyc02g063490 peroxisomal NAD-dependent malate dehydrogenase 0.04 OrthoFinder output from all 47 species
Solyc03g115990.3.1 MDH, Solyc03g115990 malate dehydrogenase component of AAA-ATPase motor complex 0.02 OrthoFinder output from all 47 species
Zm00001e017932_P003 PMDH1, Zm00001e017932 peroxisomal NAD-dependent malate dehydrogenase 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP HCCA
MF GO:0003997 acyl-CoA oxidase activity IEP HCCA
MF GO:0004096 catalase activity IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
CC GO:0005779 obsolete integral component of peroxisomal membrane IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
CC GO:0042579 microbody IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001236 Lactate/malate_DH_N 46 188
IPR022383 Lactate/malate_DH_C 190 353
No external refs found!