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  5. LOC_Os12g41110.1

LOC_Os12g41110.1 (ACAM-6, CAM6, LOC_Os12g41110)


Aliases : ACAM-6, CAM6, LOC_Os12g41110

Description : Calmodulin-like protein 5 OS=Oryza sativa subsp. japonica (sp|q948r0|cml5_orysj : 211.0)


Gene families : OG0000295 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000295_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g41110.1
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00269730 CAM3, acam-3,... Calmodulin-like protein 8 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00048p00127800 CAM3, acam-3,... Calmodulin OS=Solanum lycopersicum 0.03 OrthoFinder output from all 47 species
AT2G41090 No alias Calcium-binding EF-hand family protein 0.03 OrthoFinder output from all 47 species
Als_g36890 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12853 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64983.t1 ACAM-6, CAM6,... calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04916 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G015900.1 CAM3, acam-3,... calcium sensor *(CML) & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g02509 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g26346 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g01248 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06394 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01018070001 CML11 Calmodulin-like protein 11 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01025831001 CAM3, acam-3 Calmodulin OS=Lilium longiflorum 0.05 OrthoFinder output from all 47 species
Ore_g05980 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g26494 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06643 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0185.g025014 ACAM-6, CAM6 calcium sensor *(CML) & original description: CDS=158-607 0.02 OrthoFinder output from all 47 species
Sam_g12806 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38145 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Smo181303 ACAM-6, CAM6 Calmodulin OS=Lilium longiflorum 0.04 OrthoFinder output from all 47 species
Solyc10g081170.2.1 CAM3, acam-3,... Calmodulin-related protein OS=Petunia hybrida... 0.03 OrthoFinder output from all 47 species
Zm00001e018064_P001 ACAM-6, CAM6,... Calmodulin-like protein 5 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 98 161
IPR002048 EF_hand_dom 16 76
No external refs found!