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  5. LOC_Os12g37110.1

LOC_Os12g37110.1 (LOC_Os12g37110)


Aliases : LOC_Os12g37110

Description : no hits & (original description: none)


Gene families : OG0005558 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005558_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g37110.1
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g41250.1 LOC_Os01g41250 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g50970.1 LOC_Os01g50970 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005542 folic acid binding IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0031406 carboxylic acid binding IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0072341 modified amino acid binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:1990380 K48-linked deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR006566 FBD 329 367
No external refs found!