Aliases : PSBB, LOC_Os12g10600
Description : Photosystem II CP47 reaction center protein OS=Oryza nivara (sp|q6ene8|psbb_oryni : 407.0)
Gene families : OG0004191 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004191_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00585p00000100 | PSBB,... | Photosynthesis.photophosphorylation.photosystem II.PS-II... | 0.04 | OrthoFinder output from all 47 species | |
ATCG00680 | PSBB | photosystem II reaction center protein B | 0.06 | OrthoFinder output from all 47 species | |
Aev_g08305 | PSBB | component *(PsbB/CP47) of PS-II reaction center complex... | 0.05 | OrthoFinder output from all 47 species | |
Als_g00826 | PSBB | component *(PsbB/CP47) of PS-II reaction center complex... | 0.02 | OrthoFinder output from all 47 species | |
Aob_g02288 | PSBB | component *(PsbB/CP47) of PS-II reaction center complex... | 0.06 | OrthoFinder output from all 47 species | |
Ceric.02G013400.1 | PSBB, Ceric.02G013400 | component *(PsbB/CP47) of PS-II reaction center complex... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.02G015500.1 | PSBB, Ceric.02G015500 | component *(PsbB/CP47) of PS-II reaction center complex... | 0.06 | OrthoFinder output from all 47 species | |
Ceric.05G041400.1 | PSBB, Ceric.05G041400 | component *(PsbB/CP47) of PS-II reaction center complex... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.05G051100.1 | PSBB, Ceric.05G051100 | component *(PsbB/CP47) of PS-II reaction center complex... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.1Z019400.1 | PSBB, Ceric.1Z019400 | component *(PsbB/CP47) of PS-II reaction center complex... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.1Z021200.1 | PSBB, Ceric.1Z021200 | component *(PsbB/CP47) of PS-II reaction center complex... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.1Z162800.1 | PSBB, Ceric.1Z162800 | component *(PsbB/CP47) of PS-II reaction center complex... | 0.06 | OrthoFinder output from all 47 species | |
Ceric.30G038800.1 | PSBB, Ceric.30G038800 | not classified & original description: pacid=50609266... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.38G008000.1 | PSBB, Ceric.38G008000 | component *(PsbB/CP47) of PS-II reaction center complex... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g21021 | PSBB | component *(PsbB/CP47) of PS-II reaction center complex... | 0.12 | OrthoFinder output from all 47 species | |
Dde_g03407 | PSBB | component *(PsbB/CP47) of PS-II reaction center complex... | 0.17 | OrthoFinder output from all 47 species | |
GSVIVT01006503001 | PSBB | Photosystem II CP47 reaction center protein OS=Phaseolus vulgaris | 0.02 | OrthoFinder output from all 47 species | |
Gb_23567 | PSBB | component PsbB/CP47 of PS-II reaction center complex | 0.04 | OrthoFinder output from all 47 species | |
Gb_27294 | PSBB | Photosystem II CP47 reaction center protein OS=Cycas... | 0.04 | OrthoFinder output from all 47 species | |
Gb_40206 | PSBB | Photosystem II CP47 reaction center protein... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os06g39708.1 | PSBB, LOC_Os06g39708 | component PsbB/CP47 of PS-II reaction center complex | 0.1 | OrthoFinder output from all 47 species | |
LOC_Os09g04680.1 | PSBB, LOC_Os09g04680 | Photosystem II CP47 reaction center protein OS=Oryza... | 0.12 | OrthoFinder output from all 47 species | |
LOC_Os10g21310.1 | PSBB, LOC_Os10g21310 | component PsbB/CP47 of PS-II reaction center complex | 0.11 | OrthoFinder output from all 47 species | |
Lfl_g04892 | PSBB | component *(PsbB/CP47) of PS-II reaction center complex... | 0.1 | OrthoFinder output from all 47 species | |
Mpzg01020.1 | PSBB | component PsbB/CP47 of PS-II reaction center complex | 0.01 | OrthoFinder output from all 47 species | |
Nbi_g00884 | PSBB | component *(PsbB/CP47) of PS-II reaction center complex... | 0.05 | OrthoFinder output from all 47 species | |
Ore_g02100 | PSBB | component *(PsbB/CP47) of PS-II reaction center complex... | 0.05 | OrthoFinder output from all 47 species | |
Pnu_g00696 | PSBB | component *(PsbB/CP47) of PS-II reaction center complex... | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0004.g002254 | PSBB | not classified & original description: CDS=1-408 | 0.03 | OrthoFinder output from all 47 species | |
Sam_g10281 | No alias | component *(PsbB/CP47) of PS-II reaction center complex... | 0.03 | OrthoFinder output from all 47 species | |
Smo137729 | PSBB | Photosystem II CP47 reaction center protein OS=Angiopteris evecta | 0.07 | OrthoFinder output from all 47 species | |
Solyc00g500024.1.1 | PSBB, Solyc00g500024 | component PsbB/CP47 of PS-II reaction center complex | 0.02 | OrthoFinder output from all 47 species | |
Solyc00g500071.1.1 | PSBB, Solyc00g500071 | component PsbB/CP47 of PS-II reaction center complex | 0.02 | OrthoFinder output from all 47 species | |
Spa_g04296 | PSBB | component *(PsbB/CP47) of PS-II reaction center complex... | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0009521 | photosystem | IEA | Interproscan |
BP | GO:0009767 | photosynthetic electron transport chain | IEA | Interproscan |
CC | GO:0016020 | membrane | IEA | Interproscan |
MF | GO:0016168 | chlorophyll binding | IEA | Interproscan |
BP | GO:0019684 | photosynthesis, light reaction | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
BP | GO:0006811 | monoatomic ion transport | IEP | HCCA |
BP | GO:0006812 | monoatomic cation transport | IEP | HCCA |
MF | GO:0009055 | electron transfer activity | IEP | HCCA |
BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
CC | GO:0009523 | photosystem II | IEP | HCCA |
CC | GO:0009539 | photosystem II reaction center | IEP | HCCA |
BP | GO:0009772 | photosynthetic electron transport in photosystem II | IEP | HCCA |
BP | GO:0010109 | regulation of photosynthesis | IEP | HCCA |
BP | GO:0015979 | photosynthesis | IEP | HCCA |
BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
BP | GO:0019637 | organophosphate metabolic process | IEP | HCCA |
BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0034220 | monoatomic ion transmembrane transport | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
BP | GO:0042548 | regulation of photosynthesis, light reaction | IEP | HCCA |
BP | GO:0042549 | photosystem II stabilization | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0043467 | regulation of generation of precursor metabolites and energy | IEP | HCCA |
BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
MF | GO:0045156 | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | IEP | HCCA |
BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
BP | GO:0065007 | biological regulation | IEP | HCCA |
BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
BP | GO:0098655 | monoatomic cation transmembrane transport | IEP | HCCA |
BP | GO:0098660 | inorganic ion transmembrane transport | IEP | HCCA |
BP | GO:0098662 | inorganic cation transmembrane transport | IEP | HCCA |
BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
BP | GO:1902600 | proton transmembrane transport | IEP | HCCA |
No external refs found! |