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  5. LOC_Os12g08780.1

LOC_Os12g08780.1 (YUC11, LOC_Os12g08780)


Aliases : YUC11, LOC_Os12g08780

Description : flavin monooxygenase (YUCCA)


Gene families : OG0000787 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000787_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g08780.1
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Adi_g078435 YUC5, SUPER1 flavin-dependent monooxygenase *(YUCCA) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene36218.t2 YUC2, Aspi01Gene36218 flavin-dependent monooxygenase *(YUCCA) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0087.g042257 YUC2 flavin-dependent monooxygenase *(YUCCA) & original... 0.01 OrthoFinder output from all 47 species
GSVIVT01035678001 YUC6 Phytohormones.auxin.synthesis.indole-3-pyruvic acid... 0.03 OrthoFinder output from all 47 species
Solyc06g008050.4.1 YUC8, Solyc06g008050 flavin monooxygenase (YUCCA) 0.03 OrthoFinder output from all 47 species
Zm00001e039591_P001 YUC11, Zm00001e039591 flavin monooxygenase (YUCCA) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:2001070 starch binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!