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  5. LOC_Os12g08170.1

LOC_Os12g08170.1 (EMB3003, LOC_Os12g08170)


Aliases : EMB3003, LOC_Os12g08170

Description : dihydrolipoamide acetyltransferase component E2 of plastidial pyruvate dehydrogenase complex


Gene families : OG0003205 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003205_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g08170.1
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00107590 LTA2, PLE2,... Lipid metabolism.fatty acid synthesis.acetyl-CoA... 0.04 OrthoFinder output from all 47 species
AMTR_s00180p00054930 EMB3003,... Lipid metabolism.fatty acid synthesis.acetyl-CoA... 0.05 OrthoFinder output from all 47 species
AT1G34430 EMB3003 2-oxoacid dehydrogenases acyltransferase family protein 0.15 OrthoFinder output from all 47 species
AT3G25860 LTA2, PLE2 2-oxoacid dehydrogenases acyltransferase family protein 0.19 OrthoFinder output from all 47 species
Als_g03762 EMB3003 EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11385 LTA2, PLE2 EC_2.3 acyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0017.g014583 EMB3003 EC_2.3 acyltransferase & original description: CDS=106-1797 0.04 OrthoFinder output from all 47 species
Ceric.36G026000.1 LTA2, PLE2,... EC_2.3 acyltransferase & original description:... 0.2 OrthoFinder output from all 47 species
Cre03.g158900 EMB3003 Lipid metabolism.fatty acid synthesis.acetyl-CoA... 0.04 OrthoFinder output from all 47 species
Dac_g00894 EMB3003 EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g15875 EMB3003 EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01034492001 EMB3003 Lipid metabolism.fatty acid synthesis.acetyl-CoA... 0.11 OrthoFinder output from all 47 species
Gb_08969 LTA2, PLE2 dihydrolipoamide acetyltransferase component E2 of... 0.08 OrthoFinder output from all 47 species
Lfl_g06073 EMB3003 EC_2.3 acyltransferase & original description: none 0.06 OrthoFinder output from all 47 species
MA_10234164g0010 LTA2, PLE2 dihydrolipoamide acetyltransferase component E2 of... 0.06 OrthoFinder output from all 47 species
MA_10433674g0010 EMB3003 dihydrolipoamide acetyltransferase component E2 of... 0.1 OrthoFinder output from all 47 species
Mp4g18690.1 EMB3003 dihydrolipoamide acetyltransferase component E2 of... 0.06 OrthoFinder output from all 47 species
Nbi_g14293 EMB3003 EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43716 EMB3003 EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Smo227145 EMB3003 Lipid metabolism.fatty acid synthesis.acetyl-CoA... 0.03 OrthoFinder output from all 47 species
Solyc05g009530.3.1 LTA2, PLE2,... dihydrolipoamide acetyltransferase component E2 of... 0.12 OrthoFinder output from all 47 species
Solyc11g017250.2.1 EMB3003, Solyc11g017250 dihydrolipoamide acetyltransferase component E2 of... 0.05 OrthoFinder output from all 47 species
Spa_g05166 EMB3003 EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g31116 LTA2, PLE2 EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49559 EMB3003 EC_2.3 acyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e004154_P002 LTA2, PLE2,... dihydrolipoamide acetyltransferase component E2 of... 0.27 OrthoFinder output from all 47 species
Zm00001e018405_P001 EMB3003, Zm00001e018405 dihydrolipoamide acetyltransferase component E2 of... 0.26 OrthoFinder output from all 47 species
Zm00001e022439_P001 LTA2, PLE2,... dihydrolipoamide acetyltransferase component E2 of... 0.29 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016746 acyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004055 argininosuccinate synthase activity IEP HCCA
MF GO:0004312 fatty acid synthase activity IEP HCCA
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0004743 pyruvate kinase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006525 arginine metabolic process IEP HCCA
BP GO:0006526 arginine biosynthetic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030955 potassium ion binding IEP HCCA
MF GO:0031420 alkali metal ion binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004167 PSBD 189 224
IPR000089 Biotin_lipoyl 51 122
IPR001078 2-oxoacid_DH_actylTfrase 248 465
No external refs found!