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  5. LOC_Os12g07670.1

LOC_Os12g07670.1 (TMN1, AtTMN1, LOC_Os12g07670)


Aliases : TMN1, AtTMN1, LOC_Os12g07670

Description : Transmembrane 9 superfamily member 1 OS=Arabidopsis thaliana (sp|q940g0|tmn1_arath : 813.0)


Gene families : OG0000505 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000505_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g07670.1
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00115620 evm_27.TU.AmTr_v1... Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00070p00145350 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G08350 No alias Endomembrane protein 70 protein family 0.04 OrthoFinder output from all 47 species
AT1G10950 TMN1, AtTMN1 transmembrane nine 1 0.1 OrthoFinder output from all 47 species
AT1G14670 No alias Endomembrane protein 70 protein family 0.04 OrthoFinder output from all 47 species
AT5G37310 No alias Endomembrane protein 70 protein family 0.04 OrthoFinder output from all 47 species
Adi_g041686 TMN1, AtTMN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g057368 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g079623 TMN1, AtTMN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g083404 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g06723 TMN1, AtTMN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05218 TMN1, AtTMN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17009 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g27302 TMN1, AtTMN1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g03467 TMN1, AtTMN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g22837 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03806 TMN1, AtTMN1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g05940 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28081 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g009541 No alias not classified & original description: CDS=81-1871 0.03 OrthoFinder output from all 47 species
Azfi_s0428.g069304 No alias not classified & original description: CDS=237-1763 0.04 OrthoFinder output from all 47 species
Azfi_s0509.g074704 TMN1, AtTMN1 not classified & original description: CDS=1-1740 0.07 OrthoFinder output from all 47 species
Cba_g26284 TMN1, AtTMN1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.10G052300.1 Ceric.10G052300 not classified & original description: pacid=50613376... 0.04 OrthoFinder output from all 47 species
Ceric.22G054000.1 Ceric.22G054000 not classified & original description: pacid=50613875... 0.06 OrthoFinder output from all 47 species
Ceric.26G022100.1 TMN1, AtTMN1,... not classified & original description: pacid=50599543... 0.09 OrthoFinder output from all 47 species
Ceric.34G054800.1 TMN1, AtTMN1,... not classified & original description: pacid=50624162... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000459.14 No alias Transmembrane 9 superfamily member 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000459.15 No alias Transmembrane 9 superfamily member 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020780.24 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre01.g024350 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre16.g675958 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g03775 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10047 TMN1, AtTMN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g10048 TMN1, AtTMN1 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g36626 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03386 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05998 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08970 TMN1, AtTMN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g21769 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24030 TMN1, AtTMN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g31713 TMN1, AtTMN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01011574001 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01023343001 TMN1, AtTMN1 Transmembrane 9 superfamily member 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_07212 TMN1, AtTMN1 Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g05429 TMN1, AtTMN1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g07740 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g19351 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g40854 TMN1, AtTMN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05549 TMN1, AtTMN1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_103022g0010 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_10431134g0010 TMN1, AtTMN1 Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_18884g0010 TMN1, AtTMN1 Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp3g06160.1 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Mp3g07580.1 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g10835 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02238 TMN1, AtTMN1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g06247 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g06736 TMN1, AtTMN1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g09472 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g08253 TMN1, AtTMN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g13358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06802 TMN1, AtTMN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13530 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g10399 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10846 TMN1, AtTMN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55432 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0112.g020786 TMN1, AtTMN1 not classified & original description: CDS=134-1804 0.03 OrthoFinder output from all 47 species
Smo163520 TMN1, AtTMN1 Transmembrane 9 superfamily member 1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Smo166118 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Smo170330 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc01g103930.3.1 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.11 OrthoFinder output from all 47 species
Solyc04g014570.3.1 Solyc04g014570 Transmembrane 9 superfamily member 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc06g074310.4.1 Solyc06g074310 Transmembrane 9 superfamily member 5 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc10g044480.2.1 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Solyc11g011910.2.1 Solyc11g011910 Transmembrane 9 superfamily member 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc11g022540.3.1 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Spa_g17201 TMN1, AtTMN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22300 TMN1, AtTMN1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g40885 TMN1, AtTMN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47696 TMN1, AtTMN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g50972 TMN1, AtTMN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06605 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14792 TMN1, AtTMN1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e000978_P002 Zm00001e000978 Transmembrane 9 superfamily member 2 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Zm00001e008994_P001 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Zm00001e018414_P001 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Zm00001e038626_P002 Zm00001e038626 Transmembrane 9 superfamily member 2 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Zm00001e039502_P001 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.13 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP HCCA
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030131 clathrin adaptor complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR004240 EMP70 66 555
No external refs found!