LOC_Os11g45920.1 (WRKY26, LOC_Os11g45920)

Aliases : WRKY26, LOC_Os11g45920

Description : transcription factor (WRKY)

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os11g45920.1

Target	Alias	Description	ECC score	Gene Family Method
Adi_g054710	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g27046	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.20G087100.1	Ceric.20G087100	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
GSVIVT01022245001	ATWRKY51, WRKY51	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
GSVIVT01030174001	WRKY54, ATWRKY54	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
LOC_Os01g09080.1	WRKY72,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os01g46800.1	WRKY53,...	transcription factor (WRKY)	0.07	OrthoFinder output from all 47 species
LOC_Os11g02480.2	WRKY55,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os12g02420.1	WRKY55,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
MA_133396g0010	ATWRKY50, WRKY50	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
MA_164675g0010	WRKY42, AtWRKY42	transcription factor (WRKY)	0.05	OrthoFinder output from all 47 species
MA_23415g0010	ATWRKY50, WRKY50	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
MA_740729g0010	ATWRKY50, WRKY50	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Pir_g04293	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g59259	WRKY75, ATWRKY75	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g31084	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc05g050340.4.1	WRKY55,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Solyc06g048870.3.1	WRKY55,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc06g070990.3.1	WRKY61,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e026828_P002	ATWRKY50,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e027989_P001	WRKY53,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e031159_P001	ATWRKY50,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
MF	GO:0043531	ADP binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	10	70
IPR003657	WRKY_dom	109	164

External Links

No external refs found!

LOC_Os11g45920.1 (WRKY26, LOC_Os11g45920)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation