LOC_Os11g41910.1 (emb2738, LOC_Os11g41910)

Aliases : emb2738, LOC_Os11g41910

Description : no hits & (original description: none)

Gene families : OG0006217 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006217_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os11g41910.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00022p00249930	emb2738,...	No description available	0.09	OrthoFinder output from all 47 species
AT3G12080	emb2738	GTP-binding family protein	0.1	OrthoFinder output from all 47 species
Adi_g055754	emb2738	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Aev_g03286	emb2738	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ala_g12638	emb2738	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g25604	emb2738	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.03G078300.1	emb2738, Ceric.03G078300	not classified & original description: pacid=50572633...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020780.28	emb2738	No description available	0.03	OrthoFinder output from all 47 species
Cre16.g658450	emb2738	No description available	0.03	OrthoFinder output from all 47 species
Dac_g01675	emb2738	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g09756	emb2738	not classified & original description: none	0.05	OrthoFinder output from all 47 species
GSVIVT01025275001	emb2738	No description available	0.12	OrthoFinder output from all 47 species
Gb_22538	emb2738	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
Len_g17773	emb2738	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Mp3g03840.1	emb2738	no hits & (original description: none)	0.12	OrthoFinder output from all 47 species
Nbi_g01060	emb2738	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g25600	emb2738	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g59771	emb2738	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0264.g026925	emb2738	not classified & original description: CDS=87-1838	0.06	OrthoFinder output from all 47 species
Solyc11g065870.3.1	emb2738, Solyc11g065870	no hits & (original description: none)	0.07	OrthoFinder output from all 47 species
Tin_g03438	emb2738	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e011327_P001	emb2738, Zm00001e011327	no hits & (original description: none)	0.16	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
CC	GO:0005783	endoplasmic reticulum	IEP	HCCA
BP	GO:0006352	DNA-templated transcription initiation	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR032859	KH_dom-like	234	315
IPR006073	GTP-bd	54	175

External Links

No external refs found!

LOC_Os11g41910.1 (emb2738, LOC_Os11g41910)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation