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  5. LOC_Os11g13720.1

LOC_Os11g13720.1 (LOC_Os11g13720)


Aliases : LOC_Os11g13720

Description : no hits & (original description: none)


Gene families : OG0001180 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001180_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g13720.1
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
AT4G02360 No alias Protein of unknown function, DUF538 0.03 OrthoFinder output from all 47 species
Adi_g000421 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g02920 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03572 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g20239 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g15352 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene38207.t1 Aspi01Gene38207 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene65001.t1 Aspi01Gene65001 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0016.g014217 No alias not classified & original description: CDS=50-514 0.03 OrthoFinder output from all 47 species
Cba_g29352 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.34G004300.1 Ceric.34G004300 not classified & original description: pacid=50623747... 0.03 OrthoFinder output from all 47 species
Dde_g01921 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_27093 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g09557 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09709 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g13405 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03604 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0069.g016543 No alias not classified & original description: CDS=1-480 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s1739.g028136 No alias not classified & original description: CDS=1-480 0.04 OrthoFinder output from all 47 species
Sam_g23760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e027826_P001 Zm00001e027826 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004556 alpha-amylase activity IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007493 DUF538 41 155
No external refs found!