LOC_Os11g10000.1 (LOC_Os11g10000)

Aliases : LOC_Os11g10000

Description : transcription factor (mTERF)

Gene families : OG0000165 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000165_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os11g10000.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00060p00059830	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
AT1G62110	No alias	Mitochondrial transcription termination factor family protein	0.04	OrthoFinder output from all 47 species
AT1G62150	No alias	Mitochondrial transcription termination factor family protein	0.05	OrthoFinder output from all 47 species
AT5G23930	No alias	Mitochondrial transcription termination factor family protein	0.04	OrthoFinder output from all 47 species
Aev_g01336	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g22736	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01028382001	No alias	RNA biosynthesis.organelle...	0.04	OrthoFinder output from all 47 species
GSVIVT01028383001	No alias	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
Gb_06326	No alias	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
Lfl_g09963	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
MA_3151g0010	No alias	transcription factor (mTERF)	0.02	OrthoFinder output from all 47 species
MA_31885g0010	No alias	transcription factor (mTERF)	0.02	OrthoFinder output from all 47 species
MA_57842g0010	No alias	transcription factor (mTERF)	0.04	OrthoFinder output from all 47 species
Ore_g20233	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e022322_P001	Zm00001e022322	transcription factor (mTERF)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004252	serine-type endopeptidase activity	IEP	HCCA
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003690	MTERF	262	411

External Links

No external refs found!

LOC_Os11g10000.1 (LOC_Os11g10000)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation