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  5. LOC_Os11g05660.1

LOC_Os11g05660.1 (LOC_Os11g05660)


Aliases : LOC_Os11g05660

Description : Probable F-box protein At2g36090 OS=Arabidopsis thaliana (sp|q9sih5|fb322_arath : 117.0)


Gene families : OG0001049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001049_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g05660.1
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00031290 evm_27.TU.AmTr_v1... F-box protein At2g27310 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00025p00055630 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AT2G36090 No alias F-box family protein 0.03 OrthoFinder output from all 47 species
AT3G44326 No alias F-box family protein 0.05 OrthoFinder output from all 47 species
Aev_g04411 SLY1 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.02 OrthoFinder output from all 47 species
Aev_g33061 SLY1 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
Aob_g07109 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
Dac_g16268 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01011119001 No alias Probable F-box protein At2g36090 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_08963 SLY1 SLY-type gibberellin signal transducer. component F-box... 0.05 OrthoFinder output from all 47 species
Gb_22367 SLY2 SLY-type gibberellin signal transducer. component F-box... 0.03 OrthoFinder output from all 47 species
LOC_Os12g06030.1 LOC_Os12g06030 Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
MA_119267g0010 SLY1 SLY-type gibberellin signal transducer. component F-box... 0.02 OrthoFinder output from all 47 species
MA_146085g0010 SLY1 SLY-type gibberellin signal transducer. component F-box... 0.05 OrthoFinder output from all 47 species
MA_152693g0010 SLY1 SLY-type gibberellin signal transducer. component F-box... 0.05 OrthoFinder output from all 47 species
Mp5g06150.1 No alias SLY-type gibberellin signal transducer. component F-box... 0.03 OrthoFinder output from all 47 species
Ore_g06355 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.06 OrthoFinder output from all 47 species
Ore_g18489 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
Ore_g32241 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
Pnu_g17370 SLY1 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
Solyc04g078390.3.1 SLY1, Solyc04g078390 SLY-type gibberellin signal transducer. component F-box... 0.03 OrthoFinder output from all 47 species
Solyc10g083230.1.1 Solyc10g083230 Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e000792_P001 SLY2, Zm00001e000792 SLY-type gibberellin signal transducer. component F-box... 0.03 OrthoFinder output from all 47 species
Zm00001e009127_P001 Zm00001e009127 Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e014934_P001 SLY1, Zm00001e014934 SLY-type gibberellin signal transducer. component F-box... 0.02 OrthoFinder output from all 47 species
Zm00001e040837_P001 Zm00001e040837 Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 17 62
No external refs found!