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  5. LOC_Os10g42410.3

LOC_Os10g42410.3 (LOC_Os10g42410)


Aliases : LOC_Os10g42410

Description : transcription factor (PLATZ)


Gene families : OG0000228 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000228_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g42410.3
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00211460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.07 OrthoFinder output from all 47 species
AT1G43000 No alias PLATZ transcription factor family protein 0.04 OrthoFinder output from all 47 species
AT2G12646 No alias PLATZ transcription factor family protein 0.03 OrthoFinder output from all 47 species
AT3G60670 No alias PLATZ transcription factor family protein 0.03 OrthoFinder output from all 47 species
AT4G17900 No alias PLATZ transcription factor family protein 0.03 OrthoFinder output from all 47 species
AT5G46710 No alias PLATZ transcription factor family protein 0.01 OrthoFinder output from all 47 species
Adi_g056182 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g059752 No alias PLATZ-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g074284 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g076321 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g03897 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g11841 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g47406 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g21703 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g02292 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04112 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g17809 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g28131 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g47610 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g57143 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g23038 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13991.t1 Aspi01Gene13991 PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene21595.t1 Aspi01Gene21595 PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34065.t1 Aspi01Gene34065 PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44972.t1 Aspi01Gene44972 PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45482.t1 Aspi01Gene45482 PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene47095.t1 Aspi01Gene47095 PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene47095.t2 Aspi01Gene47095 PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0190.g056920 No alias PLATZ-type transcription factor & original description: CDS=1-966 0.02 OrthoFinder output from all 47 species
Azfi_s0246.g060041 No alias PLATZ-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Cba_g19260 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G033700.1 Ceric.04G033700 PLATZ-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.39G029500.1 Ceric.39G029500 PLATZ-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g00688 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08859 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g27708 No alias PLATZ-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01012869001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.04 OrthoFinder output from all 47 species
GSVIVT01013149001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.04 OrthoFinder output from all 47 species
GSVIVT01013455001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.04 OrthoFinder output from all 47 species
GSVIVT01031929001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.03 OrthoFinder output from all 47 species
LOC_Os02g44260.1 LOC_Os02g44260 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
LOC_Os04g50120.1 LOC_Os04g50120 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
Len_g56258 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Len_g57822 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11641 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_11224g0010 No alias transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
MA_14971g0010 No alias transcription factor (PLATZ) 0.04 OrthoFinder output from all 47 species
MA_9760264g0010 No alias transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
Msp_g01454 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g01480 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11386 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20268 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13349 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12568 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g24743 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25448 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c15_23190V3.1 Pp3c15_23190 PLATZ transcription factor family protein 0.02 OrthoFinder output from all 47 species
Ppi_g63891 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26119 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo69065 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.02 OrthoFinder output from all 47 species
Solyc02g036215.1.1 Solyc02g036215 transcription factor (PLATZ) 0.01 OrthoFinder output from all 47 species
Solyc03g044625.1.1 Solyc03g044625 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
Solyc06g061240.4.1 Solyc06g061240 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
Solyc08g005100.3.1 Solyc08g005100 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
Spa_g21761 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21762 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29503 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002426_P001 Zm00001e002426 transcription factor (PLATZ) 0.05 OrthoFinder output from all 47 species
Zm00001e007100_P003 Zm00001e007100 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
Zm00001e023175_P001 Zm00001e023175 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004664 prephenate dehydratase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006558 L-phenylalanine metabolic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009094 L-phenylalanine biosynthetic process IEP HCCA
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP HCCA
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006734 PLATZ 134 206
No external refs found!