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  5. LOC_Os10g38234.1

LOC_Os10g38234.1 (PSAB, LOC_Os10g38234)


Aliases : PSAB, LOC_Os10g38234

Description : apoprotein PsaB of PS-I complex


Gene families : OG0001111 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001111_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g38234.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00250910 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.13 OrthoFinder output from all 47 species
AMTR_s00063p00185460 PSAA Photosystem I P700 chlorophyll a apoprotein A1... 0.13 OrthoFinder output from all 47 species
AMTR_s00076p00111250 PSAB Photosystem I P700 chlorophyll a apoprotein A2... 0.13 OrthoFinder output from all 47 species
AMTR_s00334p00015340 PSAA Photosystem I P700 chlorophyll a apoprotein A1... 0.13 OrthoFinder output from all 47 species
AMTR_s01196p00002960 PSAB Photosystem I P700 chlorophyll a apoprotein A2 OS=Morus indica 0.13 OrthoFinder output from all 47 species
ATCG00340 PSAB Photosystem I, PsaA/PsaB protein 0.44 OrthoFinder output from all 47 species
ATCG00350 PSAA Photosystem I, PsaA/PsaB protein 0.4 OrthoFinder output from all 47 species
Aev_g05542 PSAA apoprotein PsaA of PS-I complex & original description: none 0.37 OrthoFinder output from all 47 species
Als_g09461 PSAA apoprotein PsaA of PS-I complex & original description: none 0.07 OrthoFinder output from all 47 species
Als_g27956 PSAB not classified & original description: none 0.11 OrthoFinder output from all 47 species
Cba_g07701 PSAA apoprotein PsaA of PS-I complex & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g16004 PSAB apoprotein PsaB of PS-I complex & original description: none 0.09 OrthoFinder output from all 47 species
Ceric.02G013200.1 PSAB, Ceric.02G013200 apoprotein PsaB of PS-I complex & original description:... 0.16 OrthoFinder output from all 47 species
Ceric.02G013300.1 PSAA, Ceric.02G013300 not classified & original description: pacid=50585842... 0.39 OrthoFinder output from all 47 species
Ceric.02G015700.1 PSAB, Ceric.02G015700 not classified & original description: pacid=50585896... 0.36 OrthoFinder output from all 47 species
Ceric.04G104200.1 PSAB, Ceric.04G104200 apoprotein PsaB of PS-I complex & original description:... 0.16 OrthoFinder output from all 47 species
Ceric.09G047700.1 PSAB, Ceric.09G047700 apoprotein PsaB of PS-I complex & original description:... 0.35 OrthoFinder output from all 47 species
Ceric.09G047800.1 PSAA, Ceric.09G047800 apoprotein PsaA of PS-I complex & original description:... 0.26 OrthoFinder output from all 47 species
Ceric.1Z022700.1 PSAB, Ceric.1Z022700 not classified & original description: pacid=50586378... 0.15 OrthoFinder output from all 47 species
Ceric.23G081400.1 PSAB, Ceric.23G081400 not classified & original description: pacid=50610997... 0.14 OrthoFinder output from all 47 species
Ceric.29G032500.1 PSAB, Ceric.29G032500 not classified & original description: pacid=50624761... 0.05 OrthoFinder output from all 47 species
Ceric.29G032700.1 PSAA, Ceric.29G032700 apoprotein PsaA of PS-I complex & original description:... 0.08 OrthoFinder output from all 47 species
Ceric.31G008700.1 PSAA, Ceric.31G008700 not classified & original description: pacid=50575048... 0.25 OrthoFinder output from all 47 species
Ceric.32G035400.1 PSAB, Ceric.32G035400 not classified & original description: pacid=50597300... 0.23 OrthoFinder output from all 47 species
Ceric.32G035600.1 PSAB, Ceric.32G035600 not classified & original description: pacid=50597464... 0.09 OrthoFinder output from all 47 species
Ceric.33G023600.1 PSAA, Ceric.33G023600 not classified & original description: pacid=50606362... 0.21 OrthoFinder output from all 47 species
Ceric.38G009600.1 PSAB, Ceric.38G009600 not classified & original description: pacid=50579849... 0.3 OrthoFinder output from all 47 species
Dac_g17800 PSAA apoprotein PsaA of PS-I complex & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g20890 PSAB apoprotein PsaB of PS-I complex & original description: none 0.25 OrthoFinder output from all 47 species
Dcu_g23259 PSAA apoprotein PsaA of PS-I complex & original description: none 0.21 OrthoFinder output from all 47 species
Ehy_g13659 PSAB not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009295001 PSAB Photosystem I P700 chlorophyll a apoprotein A2 OS=Vitis vinifera 0.08 OrthoFinder output from all 47 species
GSVIVT01014968001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01017483001 PSAB Photosystem I P700 chlorophyll a apoprotein A2 OS=Vitis vinifera 0.08 OrthoFinder output from all 47 species
GSVIVT01017484001 No alias Photosystem I P700 chlorophyll a apoprotein A1 OS=Populus alba 0.08 OrthoFinder output from all 47 species
GSVIVT01023733001 PSAA Photosystem I P700 chlorophyll a apoprotein A1... 0.09 OrthoFinder output from all 47 species
Gb_09026 PSAA Photosystem I P700 chlorophyll a apoprotein A1... 0.12 OrthoFinder output from all 47 species
Gb_11361 PSAA Photosystem I P700 chlorophyll a apoprotein A1... 0.12 OrthoFinder output from all 47 species
Gb_11944 PSAB Photosystem I P700 chlorophyll a apoprotein A2 OS=Cycas... 0.12 OrthoFinder output from all 47 species
Gb_20142 PSAA Photosystem I P700 chlorophyll a apoprotein A1... 0.03 OrthoFinder output from all 47 species
Gb_41658 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.04 OrthoFinder output from all 47 species
Lfl_g07434 PSAB apoprotein PsaB of PS-I complex & original description: none 0.16 OrthoFinder output from all 47 species
Lfl_g13216 PSAA apoprotein PsaA of PS-I complex & original description: none 0.16 OrthoFinder output from all 47 species
MA_103963g0010 PSAA Photosystem I P700 chlorophyll a apoprotein A1 OS=Pinus... 0.04 OrthoFinder output from all 47 species
MA_173626g0010 PSAB Photosystem I P700 chlorophyll a apoprotein A2 OS=Pinus... 0.02 OrthoFinder output from all 47 species
Mp1g07160.1 PSAB Photosystem I P700 chlorophyll a apoprotein A2... 0.09 OrthoFinder output from all 47 species
Mp1g16220.1 PSAA Photosystem I P700 chlorophyll a apoprotein A1... 0.09 OrthoFinder output from all 47 species
Mp3g20630.1 PSAA Photosystem I P700 chlorophyll a apoprotein A1... 0.11 OrthoFinder output from all 47 species
Nbi_g01504 PSAB apoprotein PsaB of PS-I complex & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g01818 PSAA apoprotein PsaA of PS-I complex & original description: none 0.26 OrthoFinder output from all 47 species
Ore_g09869 PSAB apoprotein PsaB of PS-I complex & original description: none 0.25 OrthoFinder output from all 47 species
Pir_g04329 PSAB apoprotein PsaB of PS-I complex & original description: none 0.11 OrthoFinder output from all 47 species
Pnu_g01754 PSAA apoprotein PsaA of PS-I complex & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g09142 PSAB apoprotein PsaB of PS-I complex & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002247 PSAB not classified & original description: CDS=1-762 0.17 OrthoFinder output from all 47 species
Sacu_v1.1_s0528.g027465 PSAB component *(uS14c) of small plastid ribosomal-subunit... 0.14 OrthoFinder output from all 47 species
Sam_g01756 No alias apoprotein PsaB of PS-I complex & original description: none 0.11 OrthoFinder output from all 47 species
Sam_g14789 No alias apoprotein PsaA of PS-I complex & original description: none 0.08 OrthoFinder output from all 47 species
Smo236842 PSAA Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.22 OrthoFinder output from all 47 species
Solyc00g500056.1.1 PSAB, Solyc00g500056 apoprotein PsaB of PS-I complex 0.29 OrthoFinder output from all 47 species
Solyc00g500057.1.1 PSAA, Solyc00g500057 apoprotein PsaA of PS-I complex 0.29 OrthoFinder output from all 47 species
Solyc00g500138.1.1 PSAB, Solyc00g500138 apoprotein PsaB of PS-I complex 0.29 OrthoFinder output from all 47 species
Solyc00g500208.1.1 PSAB, Solyc00g500208 apoprotein PsaB of PS-I complex 0.29 OrthoFinder output from all 47 species
Solyc00g500209.1.1 PSAA, Solyc00g500209 apoprotein PsaA of PS-I complex 0.29 OrthoFinder output from all 47 species
Solyc01g017300.2.1 PSAA, Solyc01g017300 Photosystem I P700 chlorophyll a apoprotein A1... 0.14 OrthoFinder output from all 47 species
Solyc05g020010.1.1 PSAB, Solyc05g020010 Photosystem I P700 chlorophyll a apoprotein A2... 0.02 OrthoFinder output from all 47 species
Solyc06g009940.1.1 PSAA, Solyc06g009940 Photosystem I P700 chlorophyll a apoprotein A1 OS=Morus... 0.31 OrthoFinder output from all 47 species
Solyc07g021250.1.1 PSAB, Solyc07g021250 Photosystem I P700 chlorophyll a apoprotein A2... 0.02 OrthoFinder output from all 47 species
Solyc12g033000.1.1 PSAB, Solyc12g033000 Photosystem I P700 chlorophyll a apoprotein A2... 0.04 OrthoFinder output from all 47 species
Solyc12g035580.1.1 PSAB, Solyc12g035580 Photosystem I P700 chlorophyll a apoprotein A2... 0.05 OrthoFinder output from all 47 species
Spa_g04697 PSAB apoprotein PsaB of PS-I complex & original description: none 0.1 OrthoFinder output from all 47 species
Spa_g04715 PSAA apoprotein PsaA of PS-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03556 PSAA apoprotein PsaA of PS-I complex & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e003909_P001 PSAB, Zm00001e003909 Photosystem I P700 chlorophyll a apoprotein A2... 0.15 OrthoFinder output from all 47 species
Zm00001e008601_P001 PSAA, Zm00001e008601 Photosystem I P700 chlorophyll a apoprotein A1... 0.18 OrthoFinder output from all 47 species
Zm00001e042034_P001 PSAA, Zm00001e042034 Photosystem I P700 chlorophyll a apoprotein A1... 0.18 OrthoFinder output from all 47 species
Zm00001e042055_P001 PSAA, Zm00001e042055 Photosystem I P700 chlorophyll a apoprotein A1... 0.18 OrthoFinder output from all 47 species
Zm00001e042056_P001 PSAB, Zm00001e042056 apoprotein PsaB of PS-I complex 0.17 OrthoFinder output from all 47 species
Zm00001e042075_P001 PSAB, Zm00001e042075 Photosystem I P700 chlorophyll a apoprotein A2... 0.16 OrthoFinder output from all 47 species
Zm00001e042077_P001 PSAA, Zm00001e042077 Photosystem I P700 chlorophyll a apoprotein A1... 0.18 OrthoFinder output from all 47 species
Zm00001e042099_P001 PSAA, Zm00001e042099 Photosystem I P700 chlorophyll a apoprotein A1... 0.18 OrthoFinder output from all 47 species
Zm00001e042101_P001 PSAB, Zm00001e042101 Photosystem I P700 chlorophyll a apoprotein A2... 0.16 OrthoFinder output from all 47 species
Zm00001e042150_P001 PSAA, Zm00001e042150 Photosystem I P700 chlorophyll a apoprotein A1... 0.18 OrthoFinder output from all 47 species
Zm00001e042151_P001 PSAB, Zm00001e042151 apoprotein PsaB of PS-I complex 0.17 OrthoFinder output from all 47 species
Zm00001e042235_P001 PSAB, Zm00001e042235 apoprotein PsaB of PS-I complex 0.17 OrthoFinder output from all 47 species
Zm00001e042354_P001 PSAB, Zm00001e042354 Photosystem I P700 chlorophyll a apoprotein A2... 0.14 OrthoFinder output from all 47 species
Zm00001e042404_P001 PSAB, Zm00001e042404 Photosystem I P700 chlorophyll a apoprotein A2... 0.16 OrthoFinder output from all 47 species
Zm00001e042440_P001 PSAB, Zm00001e042440 Photosystem I P700 chlorophyll a apoprotein A2... 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009579 thylakoid IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016168 chlorophyll binding IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001280 PSI_PsaA/B 8 727
No external refs found!