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  5. LOC_Os10g38206.1

LOC_Os10g38206.1 (NDHC, LOC_Os10g38206)


Aliases : NDHC, LOC_Os10g38206

Description : component NdhC of NDH membrane subcomplex M


Gene families : OG0004953 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004953_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g38206.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AT2G07751 No alias NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein 0.04 OrthoFinder output from all 47 species
ATCG00440 NDHC NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein 0.53 OrthoFinder output from all 47 species
Aev_g15970 NDHC component *(NdhC) of NDH membrane subcomplex M &... 0.44 OrthoFinder output from all 47 species
Aev_g45078 No alias component *(ND3/NQO7) of NADH dehydrogenase proton... 0.21 OrthoFinder output from all 47 species
Ala_g17107 No alias component *(ND3/NQO7) of NADH dehydrogenase proton... 0.03 OrthoFinder output from all 47 species
Aop_g26379 No alias component *(ND3/NQO7) of NADH dehydrogenase proton... 0.08 OrthoFinder output from all 47 species
Ceric.02G013900.1 NDHC, Ceric.02G013900 component *(NdhC) of NDH membrane subcomplex M &... 0.13 OrthoFinder output from all 47 species
Ceric.04G095500.1 Ceric.04G095500 not classified & original description: pacid=50631068... 0.04 OrthoFinder output from all 47 species
Ceric.05G057400.1 Ceric.05G057400 not classified & original description: pacid=50578518... 0.05 OrthoFinder output from all 47 species
Ceric.16G042200.1 Ceric.16G042200 not classified & original description: pacid=50589685... 0.06 OrthoFinder output from all 47 species
Ceric.1Z022200.1 NDHC, Ceric.1Z022200 component *(NdhC) of NDH membrane subcomplex M &... 0.02 OrthoFinder output from all 47 species
Ceric.1Z122500.1 Ceric.1Z122500 not classified & original description: pacid=50617115... 0.11 OrthoFinder output from all 47 species
Ceric.1Z125700.1 Ceric.1Z125700 not classified & original description: pacid=50604569... 0.08 OrthoFinder output from all 47 species
Ceric.1Z200700.1 Ceric.1Z200700 not classified & original description: pacid=50618883... 0.11 OrthoFinder output from all 47 species
Ceric.1Z247000.1 Ceric.1Z247000 not classified & original description: pacid=50628392... 0.08 OrthoFinder output from all 47 species
Ceric.1Z255200.1 Ceric.1Z255200 not classified & original description: pacid=50617103... 0.11 OrthoFinder output from all 47 species
Ceric.1Z287100.1 Ceric.1Z287100 not classified & original description: pacid=50577018... 0.08 OrthoFinder output from all 47 species
Ceric.1Z287800.1 Ceric.1Z287800 not classified & original description: pacid=50600407... 0.11 OrthoFinder output from all 47 species
Ceric.1Z293700.1 Ceric.1Z293700 not classified & original description: pacid=50576917... 0.13 OrthoFinder output from all 47 species
Ceric.1Z295900.1 Ceric.1Z295900 not classified & original description: pacid=50613699... 0.08 OrthoFinder output from all 47 species
Ceric.1Z308400.1 Ceric.1Z308400 not classified & original description: pacid=50579236... 0.13 OrthoFinder output from all 47 species
Ceric.1Z312600.1 Ceric.1Z312600 not classified & original description: pacid=50597149... 0.13 OrthoFinder output from all 47 species
Ceric.1Z314000.1 Ceric.1Z314000 not classified & original description: pacid=50567671... 0.16 OrthoFinder output from all 47 species
Ceric.1Z318400.1 Ceric.1Z318400 not classified & original description: pacid=50579281... 0.08 OrthoFinder output from all 47 species
Ceric.1Z319800.1 Ceric.1Z319800 not classified & original description: pacid=50604682... 0.11 OrthoFinder output from all 47 species
Ceric.23G013800.1 Ceric.23G013800 not classified & original description: pacid=50610037... 0.07 OrthoFinder output from all 47 species
Ceric.33G061800.1 Ceric.33G061800 not classified & original description: pacid=50606936... 0.11 OrthoFinder output from all 47 species
Ceric.35G023200.1 Ceric.35G023200 not classified & original description: pacid=50581407... 0.04 OrthoFinder output from all 47 species
Cre08.g378900 No alias NADH-ubiquinone oxidoreductase chain 3 OS=Prototheca wickerhamii 0.04 OrthoFinder output from all 47 species
Gb_11359 No alias component NdhC of NDH membrane subcomplex M 0.19 OrthoFinder output from all 47 species
Gb_17126 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g33922.1 LOC_Os12g33922 component ND3/NQO7 of NADH dehydrogenase proton... 0.04 OrthoFinder output from all 47 species
Lfl_g17857 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Lfl_g35610 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28154 No alias component *(ND3/NQO7) of NADH dehydrogenase proton... 0.02 OrthoFinder output from all 47 species
Ore_g41831 NDHC not classified & original description: none 0.29 OrthoFinder output from all 47 species
Pir_g35629 No alias component *(ND3/NQO7) of NADH dehydrogenase proton... 0.22 OrthoFinder output from all 47 species
Pp3c21_8460V3.1 Pp3c21_8460 NADH dehydrogenase 3 0.01 OrthoFinder output from all 47 species
Sam_g01625 No alias component *(ND3/NQO7) of NADH dehydrogenase proton... 0.11 OrthoFinder output from all 47 species
Smo7992 NDHC Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.02 OrthoFinder output from all 47 species
Smo7994 NDHC Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.02 OrthoFinder output from all 47 species
Solyc00g500115.1.1 Solyc00g500115 component ND3/NQO7 of NADH dehydrogenase proton... 0.04 OrthoFinder output from all 47 species
Solyc09g010890.1.1 NDHC, Solyc09g010890 no hits & (original description: none) 0.33 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031361 obsolete integral component of thylakoid membrane IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR000440 NADH_UbQ/plastoQ_OxRdtase_su3 23 119
No external refs found!