LOC_Os10g30840.1 (LOC_Os10g30840)

Aliases : LOC_Os10g30840

Description : transcription factor (ERF)

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os10g30840.1
Cluster	HCCA: Cluster_66

Target	Alias	Description	ECC score	Gene Family Method
AT1G71520	No alias	Integrase-type DNA-binding superfamily protein	0.01	OrthoFinder output from all 47 species
AT2G44840	ATERF13, ERF13, EREBP	ethylene-responsive element binding factor 13	0.02	OrthoFinder output from all 47 species
Adi_g056044	ERF110	subgroup ERF-X transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g41268	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g12877	CRF3	subgroup ERF-VI transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g37143	DREB2A, DREB2	subgroup ERF-IV/DREB2 transcription factor & original...	0.01	OrthoFinder output from all 47 species
Als_g37382	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene70906.t1	Aspi01Gene70906	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Azfi_s0015.g014119	ATERF8, ATERF-8, ERF8	not classified & original description: CDS=1-357	0.04	OrthoFinder output from all 47 species
Ceric.01G120100.1	HRE2, Ceric.01G120100	transcription factor component *(HRE/RAP2.12) of...	0.05	OrthoFinder output from all 47 species
Ceric.02G053400.1	ERF7, ATERF7,...	not classified & original description: pacid=50585332...	0.02	OrthoFinder output from all 47 species
Ceric.02G053500.1	ATERF3, ERF3,...	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ceric.03G067500.1	AtERF48, DREB2C,...	subgroup ERF-IV/DREB2 transcription factor & original...	0.04	OrthoFinder output from all 47 species
Ceric.05G034500.1	DEAR2, Ceric.05G034500	not classified & original description: pacid=50578330...	0.02	OrthoFinder output from all 47 species
Ceric.07G001200.1	Ceric.07G001200	not classified & original description: pacid=50626761...	0.02	OrthoFinder output from all 47 species
Ceric.08G023300.1	Ceric.08G023300	not classified & original description: pacid=50638876...	0.02	OrthoFinder output from all 47 species
Ceric.13G085000.1	Ceric.13G085000	subgroup ERF-III transcription factor & original...	0.01	OrthoFinder output from all 47 species
Ceric.13G085200.1	Ceric.13G085200	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ceric.13G085300.1	Ceric.13G085300	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ceric.13G085400.1	Ceric.13G085400	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ceric.15G008100.1	DREB26, Ceric.15G008100	not classified & original description: pacid=50640261...	0.03	OrthoFinder output from all 47 species
Ceric.15G043700.1	HRE2, Ceric.15G043700	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Ceric.24G043100.1	DEAR4, RAP2.10,...	not classified & original description: pacid=50629256...	0.04	OrthoFinder output from all 47 species
Ceric.28G013900.1	Ceric.28G013900	subgroup ERF-V transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ceric.30G046100.1	RAP2.1, Ceric.30G046100	not classified & original description: pacid=50608854...	0.03	OrthoFinder output from all 47 species
Ceric.30G046200.1	DREB26, Ceric.30G046200	not classified & original description: pacid=50608865...	0.05	OrthoFinder output from all 47 species
Ceric.30G046400.1	RAP2.1, Ceric.30G046400	not classified & original description: pacid=50608761...	0.03	OrthoFinder output from all 47 species
Ceric.30G046500.1	Ceric.30G046500	not classified & original description: pacid=50609571...	0.02	OrthoFinder output from all 47 species
Ceric.31G058400.1	TINY2, Ceric.31G058400	subgroup ERF-III transcription factor & original...	0.01	OrthoFinder output from all 47 species
Ceric.37G041600.1	RAP2.6, Ceric.37G041600	not classified & original description: pacid=50615741...	0.02	OrthoFinder output from all 47 species
Ceric.38G032800.1	DREB26, Ceric.38G032800	not classified & original description: pacid=50580507...	0.04	OrthoFinder output from all 47 species
Dac_g14879	ERF110	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g19647	DREB26	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g37778	DEAR1, CEJ1, ATERF#011	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g40206	DEAR1, CEJ1, ATERF#011	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Dcu_g04627	No alias	subgroup ERF-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g14596	No alias	subgroup ERF-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g19848	RAP2.6	subgroup ERF-X transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Gb_06962	ERF72, EBP, ATEBP, RAP2.3	transcription factor (ERF)	0.01	OrthoFinder output from all 47 species
Gb_07476	ERF-6-6, ERF6, ATERF6	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Gb_20532	DEAR3	no hits & (original description: none)	0.01	OrthoFinder output from all 47 species
Gb_24891	RAP2.12	transcription factor (ERF)	0.01	OrthoFinder output from all 47 species
Gb_26438	HRE1	transcription factor (ERF)	0.01	OrthoFinder output from all 47 species
Gb_32995	No alias	Ethylene-responsive transcription factor ERF016...	0.01	OrthoFinder output from all 47 species
LOC_Os02g13710.1	TINY2, LOC_Os02g13710	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Len_g02969	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Len_g09395	No alias	subgroup ERF-X transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
MA_40048g0010	No alias	no hits & (original description: none)	0.01	OrthoFinder output from all 47 species
MA_4182g0010	Rap2.6L	no hits & (original description: none)	0.01	OrthoFinder output from all 47 species
Mp5g02590.1	No alias	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Mp7g13760.1	RAP2.4	transcription factor (DREB)	0.04	OrthoFinder output from all 47 species
Nbi_g00480	ERF7, ATERF7, ATERF-7	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Pir_g11267	DREB2A, DREB2	subgroup ERF-IV/DREB2 transcription factor & original...	0.03	OrthoFinder output from all 47 species
Pir_g20447	No alias	subgroup ERF-II transcription factor *(ERF16/17/18) &...	0.02	OrthoFinder output from all 47 species
Pir_g23562	ERF-1, ATERF-1	subgroup ERF-IX transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g10709	No alias	subgroup ERF-V transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g11378	TINY2	subgroup ERF-III transcription factor & original...	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015276	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.01	OrthoFinder output from all 47 species
Zm00001e004208_P001	Zm00001e004208	transcription factor (DREB)	0.04	OrthoFinder output from all 47 species
Zm00001e023078_P001	Zm00001e023078	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Zm00001e023149_P001	ERF5, ATERF-5,...	transcription factor (ERF)	0.05	OrthoFinder output from all 47 species
Zm00001e032483_P001	Zm00001e032483	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	11	62

External Links

No external refs found!

LOC_Os10g30840.1 (LOC_Os10g30840)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation