Heatmap: Cluster_66 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
1.24 1.83 1.33 1.96 0.59 -2.31 1.8 2.1 0.17 -1.76 0.69 0.94 -1.68 -1.43 - - 1.6 0.44 0.47 0.76 -5.48 -0.07 -0.63 -0.78 - -1.63 1.21 - - - - - - - - - - - - - -4.98 - -5.92 -2.4 - - 3.02 -0.4 -2.77
1.56 -1.42 -0.17 -8.32 -1.34 -6.37 -6.32 -4.65 2.8 -7.33 -1.61 1.47 - -6.18 1.25 1.19 -0.24 0.63 3.19 0.5 -3.9 1.02 -4.25 0.92 -0.48 1.02 0.7 -5.9 -5.67 - -4.93 -5.37 -3.77 -5.07 -3.23 -5.46 -6.19 -3.38 -5.07 -4.67 -1.96 -3.29 -3.45 -5.42 1.29 2.24 -5.92 -5.33 -4.89
LOC_Os01g10230.1 (LOC_Os01g10230)
3.99 1.83 3.21 -4.51 - - -1.65 -0.38 0.18 1.31 2.66 - - 0.81 - - -1.83 -0.78 - -0.23 - -4.62 - - -0.85 -0.74 -1.31 - - - -2.41 - - - - - - - - -5.87 - -5.07 - 0.76 0.78 -0.73 - - -
LOC_Os01g10760.1 (LOC_Os01g10760)
3.8 1.68 0.85 - -3.14 2.36 - - 0.86 - -1.15 -2.15 -1.53 - 0.59 0.61 - -2.46 - -0.09 -0.42 -3.06 -1.21 -2.47 - 1.51 0.3 -0.3 - - - 1.08 - -0.12 1.13 -0.52 - -0.76 0.29 -1.12 -0.17 -0.28 0.11 - - -1.17 - - -
LOC_Os01g14720.1 (LOC_Os01g14720)
2.85 1.21 0.99 -2.36 -5.47 -5.78 -0.3 -0.4 1.79 -1.09 -0.5 0.59 -0.84 -0.17 - - 2.0 1.41 3.6 0.11 -6.54 -7.07 -7.01 -6.75 2.52 - -4.9 - - -5.49 -5.66 - - - -5.41 - -5.63 -5.88 - -6.06 -5.27 -6.82 -7.52 -3.33 -4.32 -2.79 -0.98 -0.59 -0.28
LOC_Os01g14750.1 (LOC_Os01g14750)
3.07 -1.72 -0.13 - - - - - -0.55 - - - - - - - -2.15 2.24 4.82 -0.29 - - - - 2.25 - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os01g35590.1 (LOC_Os01g35590)
3.39 1.66 3.94 -2.68 -1.03 -0.3 -0.56 -0.28 0.3 2.52 1.23 -5.85 0.43 0.22 -1.52 -3.07 0.34 -0.64 0.6 -2.11 -8.31 -4.6 -6.42 -4.95 -2.97 -4.47 -3.46 - - - -4.17 -5.17 -4.2 - - - -4.34 - - -7.65 -4.97 -6.75 - -3.03 -3.7 -2.41 - -3.64 -4.64
LOC_Os01g39650.1 (LOC_Os01g39650)
1.61 0.55 2.75 - - -1.69 -5.51 -5.5 1.46 -4.54 -1.21 2.59 - -2.02 0.67 0.46 -2.93 0.92 3.47 -0.86 -6.1 -1.14 -6.96 -4.51 -2.01 0.27 0.24 - - -3.05 - -3.2 - - -2.96 - -3.17 - - -7.04 -5.76 -3.59 -4.88 - 1.67 2.11 - - -3.68
LOC_Os02g03640.1 (LOC_Os02g03640)
-0.15 -4.96 -3.23 -4.35 -4.06 2.68 -8.12 - 2.56 -2.13 -1.28 1.68 0.48 0.76 1.89 1.91 -3.48 1.8 3.01 0.78 -6.4 -4.9 -6.17 -0.05 -2.46 1.19 1.93 - -6.54 -5.92 - -5.68 -5.16 - -6.93 -5.57 -5.79 - -5.57 -5.05 -3.15 -3.17 -3.01 -6.05 - - - -7.6 -6.35
LOC_Os03g28175.1 (LOC_Os03g28175)
1.76 3.63 1.47 - - -3.11 - - - - -0.64 2.04 - 2.72 - -1.18 - 1.09 3.29 0.68 -5.96 -0.25 -6.26 -3.86 0.79 -2.18 -1.8 - - - - -2.82 - - - - - - - - -5.26 - - - -0.58 0.07 - - -
LOC_Os03g48250.1 (LOC_Os03g48250)
2.26 2.34 2.16 - - - -1.06 -2.69 2.52 - 1.67 -3.21 - -2.08 - - -3.87 -3.16 2.78 -0.27 - -1.73 -1.5 -1.27 - - - - - -0.82 - - - - - - - - -1.24 -4.82 -2.0 - -2.74 -5.36 - 0.26 0.61 3.0 1.86
LOC_Os04g02090.1 (LOC_Os04g02090)
2.19 3.42 -0.83 - - - - -2.91 -0.12 - -2.96 -0.1 - 0.15 1.9 3.42 -2.42 -0.59 2.01 -1.24 -2.03 0.36 0.0 0.27 0.82 -1.2 - - - -0.59 - - - - - - -0.72 - - -1.44 -2.1 -2.13 -2.49 -3.83 -0.24 0.15 - - -
LOC_Os04g25930.1 (LOC_Os04g25930)
3.19 - 2.28 - - - 4.95 - - - 2.03 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os04g30610.1 (LOC_Os04g30610)
1.25 1.84 0.45 -3.85 -3.04 1.64 -5.04 -3.96 3.06 -3.92 -3.0 2.26 -5.15 -3.48 -1.08 -0.65 -0.14 1.15 2.7 -0.23 -3.41 1.09 0.93 1.1 -0.95 0.66 0.77 -0.78 -3.24 -2.7 - -4.15 -2.18 - - -3.84 -1.12 -4.05 -4.0 -3.83 -4.52 -2.46 -3.93 -1.82 -4.02 -3.1 -1.6 -1.97 -
LOC_Os04g30690.1 (LOC_Os04g30690)
1.54 1.81 1.08 -0.52 -2.53 1.9 -0.67 0.05 1.0 -1.23 -1.01 2.45 - -3.12 -1.95 1.17 0.35 1.08 2.73 -0.82 -4.3 -0.38 -0.79 -0.7 -1.82 0.37 0.6 - -3.16 -1.87 - -2.64 - - -2.78 -3.14 -3.2 - - -4.65 -3.09 -3.13 -2.91 0.83 0.55 -1.84 0.16 0.36 -1.92
LOC_Os04g41759.1 (LOC_Os04g41759)
2.61 1.36 2.7 - -6.39 - -1.68 -1.45 -0.76 -1.93 -0.68 -3.38 - -3.67 - - 1.11 -4.94 0.54 - -8.11 -7.73 -5.39 -7.66 - - - -5.48 - -5.23 -5.4 -5.3 - - - - -4.36 - - -4.24 -7.52 -2.82 -4.76 -1.84 -1.49 0.45 -0.68 2.63 4.22
LOC_Os05g03010.1 (LOC_Os05g03010)
1.39 3.39 - - - - - - 2.67 - -0.05 0.47 - 3.3 - 3.21 - -0.89 - -0.96 - - - - - - - 2.26 - - - - - - - - - - - - -1.77 - - - - 0.96 - - -
1.36 2.71 0.07 0.11 -0.61 -0.63 -0.57 0.13 3.49 - 1.16 -3.75 - -0.16 -1.22 -2.2 2.39 2.15 2.61 -1.67 -3.94 - -3.76 - - - - - - - - -2.19 - - - - - - - -3.76 -3.28 -3.28 - -4.61 -3.64 - 0.26 -0.14 -0.64
LOC_Os05g16540.1 (LOC_Os05g16540)
2.14 2.22 -0.89 0.44 1.33 0.02 1.55 1.31 0.84 -2.65 0.09 -4.06 -2.03 0.31 0.22 -0.74 0.78 0.18 2.93 -1.23 -3.66 - -4.37 -3.64 0.95 - -0.49 - - - - -1.74 - - - - -2.0 - - -5.46 -3.39 -4.67 -2.3 -0.81 - -1.75 2.02 1.48 -1.31
1.55 0.08 0.89 1.89 1.93 2.56 -1.92 -1.13 0.51 -2.23 -3.12 -3.06 -5.04 -4.95 0.27 -0.32 -7.54 -1.64 4.38 -0.14 -7.36 -3.85 -7.88 -3.3 -2.78 -0.44 0.52 - -3.56 - - -6.05 - -2.61 - - - - -4.3 - -6.23 -5.57 - -6.7 -3.35 -2.98 - - -
LOC_Os05g34390.1 (LOC_Os05g34390)
2.59 0.89 -0.71 -4.04 -2.07 -0.03 -1.95 -1.94 3.15 -4.65 -1.46 -4.3 -1.31 -0.63 -0.23 -0.22 0.11 1.59 4.25 -0.62 -5.67 -4.72 -3.76 -3.86 -0.82 -2.8 -2.86 - - -2.56 - -3.28 -2.44 - - - -3.77 - - -5.48 -3.76 -3.72 -3.57 -4.22 -3.0 -2.3 - -2.63 -1.17
LOC_Os05g34490.1 (LOC_Os05g34490)
-0.99 -1.14 -0.31 -6.64 -6.76 -2.21 -5.22 -2.95 0.15 -1.77 0.31 0.31 1.15 1.03 - - -0.47 -3.27 2.79 -0.7 - -7.34 -9.01 -3.66 -1.7 0.01 -0.19 - - - - - - - - - - - - -7.78 -6.16 -6.82 -6.43 -2.05 -1.06 -0.06 2.18 2.61 3.97
LOC_Os05g42240.1 (LOC_Os05g42240)
4.97 1.5 2.34 - -4.68 -4.57 0.92 -0.26 0.15 -4.69 1.44 -4.56 -4.96 -2.44 -2.84 - 0.08 -2.29 - -6.0 -7.76 -6.82 - -7.82 - -3.2 - - - - - - - - - - - - - - -6.82 -5.68 - -6.66 -4.17 -4.6 -0.05 -4.59 -3.03
2.71 -2.14 -2.98 - - -4.92 - - - - -2.43 - - - 2.87 3.13 -5.62 -6.16 4.67 - - - -5.45 - - - - - - - - - - - - - - - - - -4.57 - -4.08 - - - - - -2.3
LOC_Os06g09010.1 (LOC_Os06g09010)
0.58 1.97 0.91 - - 1.54 2.28 2.26 0.76 - 1.24 - - - - - 2.32 - - -4.64 -0.78 -2.68 -0.57 - - - - - - - - 1.84 - - - 1.33 1.27 - - 1.42 0.53 0.52 2.2 - - - - - -
LOC_Os06g37790.1 (LOC_Os06g37790)
1.03 1.43 1.21 - -3.76 - -0.47 -0.28 1.18 -1.2 -0.23 1.22 0.67 1.38 - - -1.82 -1.23 3.04 1.45 -2.58 -4.7 -3.43 -2.33 0.43 -0.41 0.22 - - -1.42 - -2.18 - - - -1.42 - - - -4.45 -2.83 -3.24 -2.0 -2.38 1.58 1.88 0.44 0.4 1.91
LOC_Os06g41870.1 (LOC_Os06g41870)
0.4 2.34 - -0.49 - -0.47 0.86 0.64 - 0.33 -0.79 - 2.38 0.78 - - -0.37 -0.61 4.37 -2.94 -2.77 - -0.85 - - - - - - - - - - - - - 0.97 - - - - - - 1.08 0.23 -0.22 - - -
LOC_Os06g45490.1 (LOC_Os06g45490)
4.2 4.85 - - - - - - - - 0.78 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os07g02860.1 (LOC_Os07g02860)
1.83 2.6 -2.45 - -2.66 - 0.65 -0.06 - -0.3 -0.05 -1.0 -0.65 -1.93 - - -0.95 -0.16 4.66 -1.61 - - -4.23 -4.09 - - -0.67 - - - - -1.46 - - - - - - 0.27 - -3.42 - - 1.28 0.59 - - - -
0.74 2.07 -2.93 0.37 - -0.35 -0.14 -0.23 -1.49 -0.05 0.1 0.06 0.79 0.31 0.46 -0.1 1.08 -0.14 4.17 -1.01 -1.96 -4.2 -2.31 -3.43 -0.98 - -2.45 - -1.69 - - -1.85 - - -1.18 - -2.14 -1.49 -1.74 -3.08 -2.52 -2.53 -3.27 -0.27 1.08 0.9 - -1.65 -
LOC_Os07g11150.3 (LOC_Os07g11150)
-0.3 -4.07 -0.08 -3.4 -2.8 2.99 -4.62 -4.8 2.29 -2.28 -1.31 1.6 -0.39 0.68 1.7 1.76 -3.03 1.49 2.31 1.19 -3.38 -4.19 -3.17 0.97 -1.74 1.66 1.75 -2.79 -3.51 -3.96 -3.64 -3.86 -3.45 -3.49 -3.6 -2.83 -3.4 -3.25 -3.3 -2.98 -1.37 -2.68 -1.97 -4.24 -6.02 -6.11 -6.81 -7.29 -9.45
LOC_Os07g24950.1 (LOC_Os07g24950)
- 2.5 - -0.92 - - - - 3.26 - 2.66 - - 4.69 - - - -4.86 - -2.15 -2.48 - -3.27 -2.39 - - - - - - - - - - - - - - - - - -1.72 - - - - - - -
LOC_Os07g24960.1 (LOC_Os07g24960)
0.98 1.91 -3.52 - - 1.65 - - -2.05 - 3.02 -3.06 - 4.81 - - - -5.05 - 0.51 -5.13 - -4.42 -2.32 - - - - - - - 0.37 - - - - - - -1.71 -4.54 -3.76 - -2.61 - -23.41 - - - -
LOC_Os07g25770.1 (LOC_Os07g25770)
1.11 0.61 -0.62 -0.62 -1.94 3.03 -4.44 -3.2 0.7 -4.47 -1.47 - - -3.6 - - -3.28 0.74 4.68 -0.05 - -0.71 -7.04 -5.57 0.39 -0.94 -1.39 - - - - - - - - - - - - -6.63 - - - -1.98 -1.03 -0.73 -3.51 -3.7 -0.61
LOC_Os08g01400.1 (LOC_Os08g01400)
1.98 -0.17 -0.75 -4.73 -3.68 0.7 -0.98 -2.85 -1.23 -4.56 0.03 -4.76 -2.57 -1.52 -3.95 -3.14 -1.92 -2.0 5.13 -3.08 -6.08 -6.35 -7.67 -6.34 -1.45 -5.71 -3.68 - - -5.98 - -4.86 - - - -5.54 - -5.45 -6.57 -7.13 -6.68 -7.17 -7.84 -1.19 -1.83 -1.88 -0.9 -2.92 0.08
LOC_Os08g08130.1 (LOC_Os08g08130)
-1.76 -1.39 3.46 -1.56 -1.87 -0.1 -1.2 0.19 -2.37 0.17 3.5 -4.49 -1.41 4.01 - - 0.16 -2.4 - -2.35 -5.35 -7.97 -6.7 -8.05 - - -5.91 - -4.15 - -6.0 -2.39 -5.48 -5.2 -4.65 - - -2.83 -5.2 -4.18 -5.91 -3.2 -2.44 1.25 -4.42 -5.56 -4.54 -4.28 -3.53
LOC_Os09g03570.1 (LOC_Os09g03570)
2.99 2.55 1.91 -2.15 -0.97 1.92 -1.47 -1.53 2.25 1.12 0.76 0.82 0.98 2.82 -2.89 -2.31 -0.48 0.86 -0.21 -2.24 -3.72 -3.91 -5.29 -2.94 - -3.68 -4.22 - - -5.07 -3.98 -1.98 - - -3.98 -5.08 -3.49 -2.82 -3.53 -5.16 -4.12 -3.97 -2.82 -2.22 -1.62 -1.87 -1.55 -2.41 -
0.5 -5.32 -8.14 -0.19 2.06 -3.31 -0.04 -0.89 2.44 -5.28 -2.38 -4.31 - -0.3 3.06 3.26 - 1.43 3.52 0.59 - - -7.99 -11.86 -0.33 - - - - - - -8.23 - - -7.42 - - - - -7.53 -6.96 -6.2 -8.13 -11.72 - - - - -
LOC_Os10g04280.1 (LOC_Os10g04280)
5.37 0.44 0.4 - -3.1 -3.45 -2.51 -2.04 0.78 -6.44 -0.39 -2.94 - -1.79 - - -1.06 -7.21 -0.61 -12.22 -4.74 -6.1 -5.97 -6.17 - - - - - - - - - - -5.15 - - -3.32 -4.7 - - - - - - - - - -
LOC_Os10g05520.1 (LOC_Os10g05520)
2.25 0.16 2.88 2.45 0.5 2.89 1.33 1.74 2.43 0.83 0.79 -4.48 -4.53 -3.63 - - -1.2 0.25 0.23 -2.39 -6.31 -4.45 - -6.85 0.98 -2.35 -2.21 - - - - -4.54 - - -3.29 - - - - - -7.36 -5.98 -6.55 -0.99 -3.05 - - -3.11 -2.21
LOC_Os10g30840.1 (LOC_Os10g30840)
2.78 4.36 1.16 - - - - - 2.19 - -3.36 - - - - - - - - 2.76 - - - - - - - - - - - - - - - - - - - - - - - 2.97 - - - - -
LOC_Os10g35160.1 (LOC_Os10g35160)
0.94 -0.12 1.06 -3.24 - -2.55 -5.46 -3.47 1.46 -3.03 0.07 1.38 1.3 1.96 - - -0.87 -1.06 3.72 0.93 - -6.48 - -2.41 - -1.39 -0.45 - - - - -3.4 - - - - - - - - -8.27 -7.34 - -8.05 1.33 1.56 0.07 0.32 2.46
LOC_Os11g36520.1 (LOC_Os11g36520)
3.7 3.64 - - 1.81 - - - 2.52 - -4.19 - - - - - - - - - - - - 1.21 - - - - - - - 2.94 - - 1.53 - - - - - -1.74 - 0.03 - - - - - -
LOC_Os11g36530.1 (LOC_Os11g36530)
3.56 4.28 - - 2.45 1.85 -0.16 2.04 1.39 - -3.71 - - - - - - - - - -1.99 - - - - - - - - - - -0.45 - - - - - - - - - - - - - - - - -
LOC_Os11g38500.1 (LOC_Os11g38500)
1.71 0.99 -0.01 -1.61 -3.79 - 2.46 2.54 2.25 0.42 -0.19 -3.17 - -5.98 1.52 1.53 1.69 0.72 2.3 1.09 -3.38 -5.1 -6.49 -7.38 -1.2 -0.02 0.5 - -9.88 -3.53 -2.93 -2.04 -3.15 - -4.12 -1.79 -4.08 -2.76 -3.29 -4.62 -2.97 -3.14 -3.41 -0.34 - -3.46 -1.98 -1.98 -1.67
LOC_Os11g44000.1 (LOC_Os11g44000)
2.47 1.63 3.86 0.85 -4.57 1.8 1.49 1.25 -1.62 -4.41 -2.28 -2.52 - - - - - -5.85 2.89 -1.42 - - -5.01 -2.6 - 1.96 1.33 - - - - - - - - - - - - -5.43 - - -5.05 -3.76 - - - - -
LOC_Os12g30720.1 (LOC_Os12g30720)
2.65 2.28 -1.04 -3.82 - 0.28 - - 2.9 - -9.51 0.7 - - - - -4.41 -2.8 4.08 1.36 -3.79 -1.9 -2.64 1.83 - - -0.2 - - - - 0.02 - - - - - - - - -2.3 - - -4.96 - 0.2 - - -
LOC_Os12g30760.1 (LOC_Os12g30760)
1.79 -0.0 0.82 -3.93 -2.17 1.56 -3.72 -3.86 2.67 -3.41 -0.7 2.19 -5.27 -4.15 -4.17 -2.58 -4.81 1.32 3.15 0.86 -4.24 -1.72 -4.2 2.06 -0.39 -2.5 -2.29 -6.31 -4.54 -3.15 -6.59 -3.68 -2.98 -2.71 -3.98 -5.31 -4.16 -4.42 -4.91 -4.53 -0.92 -4.73 -3.92 -0.3 1.07 1.82 -1.31 -2.99 -3.79
LOC_Os12g36330.1 (LOC_Os12g36330)
2.21 2.78 0.5 - - - -1.85 -1.09 0.9 - 0.72 0.48 -0.83 -2.33 - - -3.76 -0.06 4.22 1.73 - - -5.15 -3.17 - -1.17 1.68 - - - - -2.86 - - - - - - - - - - - - 1.01 -0.43 - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.