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  5. LOC_Os10g29260.1

LOC_Os10g29260.1 (ATBPM2, BPM2, LOC_Os10g29260)


Aliases : ATBPM2, BPM2, LOC_Os10g29260

Description : BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana (sp|q8l765|bpm1_arath : 204.0)


Gene families : OG0000564 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000564_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g29260.1

Target Alias Description ECC score Gene Family Method Actions
LOC_Os08g03510.1 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 2... 0.03 OrthoFinder output from all 47 species
LOC_Os08g13180.1 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 2... 0.02 OrthoFinder output from all 47 species
LOC_Os10g28810.1 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 2... 0.01 OrthoFinder output from all 47 species
LOC_Os10g29380.1 ATBPM3, BPM3,... BTB/POZ and MATH domain-containing protein 3... 0.06 OrthoFinder output from all 47 species
Zm00001e005040_P001 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 2... 0.04 OrthoFinder output from all 47 species
Zm00001e021927_P001 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 1... 0.02 OrthoFinder output from all 47 species
Zm00001e030370_P001 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 2... 0.05 OrthoFinder output from all 47 species
Zm00001e030372_P002 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 1... 0.03 OrthoFinder output from all 47 species
Zm00001e033378_P002 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 2... 0.04 OrthoFinder output from all 47 species
Zm00001e039614_P001 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 1... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 121 231
No external refs found!