LOC_Os10g26280.1 (ORC3, ATORC3, LOC_Os10g26280)

Aliases : ORC3, ATORC3, LOC_Os10g26280

Description : component ORC3 of origin recognition complex

Gene families : OG0006133 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006133_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os10g26280.1
Cluster	HCCA: Cluster_80

Target	Alias	Description	ECC score	Gene Family Method
Adi_g010570	ORC3, ATORC3	component *(ORC3) of origin recognition complex &...	0.02	OrthoFinder output from all 47 species
Ceric.22G025100.1	ORC3, ATORC3,...	component *(ORC3) of origin recognition complex &...	0.03	OrthoFinder output from all 47 species
Dcu_g19092	ORC3, ATORC3	component *(ORC3) of origin recognition complex &...	0.03	OrthoFinder output from all 47 species
GSVIVT01024325001	ORC3, ATORC3	Cell cycle.interphase.DNA...	0.02	OrthoFinder output from all 47 species
Gb_17510	ORC3, ATORC3	component ORC3 of origin recognition complex	0.04	OrthoFinder output from all 47 species
MA_289035g0010	ORC3, ATORC3	component ORC3 of origin recognition complex	0.03	OrthoFinder output from all 47 species
Mp3g18090.1	ORC3, ATORC3	component ORC3 of origin recognition complex	0.03	OrthoFinder output from all 47 species
Nbi_g11100	ORC3, ATORC3	component *(ORC3) of origin recognition complex &...	0.02	OrthoFinder output from all 47 species
Solyc12g013880.2.1	ORC3, ATORC3,...	component ORC3 of origin recognition complex	0.02	OrthoFinder output from all 47 species
Tin_g28707	ORC3, ATORC3	component *(ORC3) of origin recognition complex &...	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0000808	origin recognition complex	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005664	nuclear origin of replication recognition complex	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006260	DNA replication	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003896	DNA primase activity	IEP	HCCA
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	HCCA
MF	GO:0004146	dihydrofolate reductase activity	IEP	HCCA
BP	GO:0006269	DNA replication, synthesis of RNA primer	IEP	HCCA
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	HCCA
BP	GO:0006760	folic acid-containing compound metabolic process	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0009262	deoxyribonucleotide metabolic process	IEP	HCCA
BP	GO:0009263	deoxyribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009396	folic acid-containing compound biosynthetic process	IEP	HCCA
MF	GO:0010181	FMN binding	IEP	HCCA
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	HCCA
MF	GO:0016646	oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
BP	GO:0042398	cellular modified amino acid biosynthetic process	IEP	HCCA
BP	GO:0042558	pteridine-containing compound metabolic process	IEP	HCCA
BP	GO:0042559	pteridine-containing compound biosynthetic process	IEP	HCCA
CC	GO:0042575	DNA polymerase complex	IEP	HCCA
CC	GO:0043625	delta DNA polymerase complex	IEP	HCCA
BP	GO:0044249	cellular biosynthetic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
BP	GO:0046653	tetrahydrofolate metabolic process	IEP	HCCA
BP	GO:0046654	tetrahydrofolate biosynthetic process	IEP	HCCA
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
MF	GO:0097747	RNA polymerase activity	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA
CC	GO:1990234	transferase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR040855	ORC_WH_C	592	716
IPR020795	ORC3	65	213
IPR020795	ORC3	233	365

External Links

No external refs found!

LOC_Os10g26280.1 (ORC3, ATORC3, LOC_Os10g26280)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation