Heatmap: Cluster_80 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
LOC_Os01g24210.1 (LOC_Os01g24210)
2.05 1.26 -1.97 -0.34 -1.64 4.4 0.39 0.24 -1.71 -0.44 -0.52 - -0.35 0.15 -4.82 -3.8 0.9 -0.38 1.29 -0.84 -6.2 -6.89 -4.36 -7.94 -1.57 -2.41 -3.14 -5.04 - - - -3.64 - - - -4.38 - -4.32 -3.24 -7.42 -7.05 -8.51 -5.5 -0.09 -0.8 -1.19 -0.07 0.18 1.58
1.14 0.91 0.53 -4.07 -2.75 4.44 -1.07 -0.53 -1.52 -0.92 -0.52 -1.13 0.12 -0.14 0.12 -0.88 1.45 -1.53 - -0.15 -1.24 -0.8 -0.93 -0.93 - -0.24 0.41 -1.8 - - -1.95 -3.94 -0.98 - -0.81 -1.03 -1.11 -0.5 - -4.63 -1.45 -2.35 -1.67 -1.36 -2.66 -2.66 -2.31 -1.41 -0.1
-0.18 0.26 -0.05 -2.41 -2.18 3.37 -0.47 -0.41 -0.82 -1.08 -0.79 0.14 -0.14 -0.19 -0.56 -0.03 -0.1 -1.1 -2.31 0.89 -0.87 -0.43 -0.92 -1.08 1.93 1.2 1.3 -0.13 -0.78 -1.14 -1.25 -0.52 -0.86 -2.35 -0.69 -0.47 -0.68 -0.3 -0.96 -1.35 -1.07 -1.24 -0.91 0.16 -0.09 -0.77 -1.86 -1.0 -0.22
0.81 1.03 1.3 -1.94 -0.9 4.12 0.65 0.3 0.16 -0.93 -0.55 0.52 -0.1 -0.23 -2.28 -2.54 1.29 -0.31 0.37 -0.59 -3.69 -2.93 -3.92 -4.51 -2.4 -0.6 -0.42 -3.63 -4.32 -3.66 -3.76 -2.8 -3.57 -4.74 -3.08 -3.1 -3.06 -2.96 -3.11 -4.33 -3.18 -3.74 -3.09 -0.55 -0.37 -0.24 0.45 0.25 1.26
LOC_Os01g51580.1 (LOC_Os01g51580)
-1.59 1.18 1.83 -2.04 -2.11 5.31 -2.61 - - -2.63 -2.9 - -2.39 -1.05 - - - -2.12 - -3.19 - -5.36 -2.4 -4.19 - - - - - - -1.66 - - - - - - - - - - - -3.81 -0.62 - - - - -
1.53 -1.01 1.52 -2.78 -1.91 4.13 -0.02 -0.31 0.17 -1.59 -0.6 -0.5 -0.74 -0.37 -1.7 -2.09 1.74 -1.16 1.2 -0.89 -2.34 -2.71 -2.35 -2.76 -2.44 -1.38 -1.15 -2.27 -2.93 -2.36 -2.69 -1.71 -2.48 -2.85 -2.65 -2.35 -2.42 -2.26 -2.45 -2.76 -2.44 -2.21 -2.15 -0.85 -1.34 -0.39 0.79 -0.03 1.31
LOC_Os02g33310.1 (LOC_Os02g33310)
2.18 -0.89 1.2 0.5 0.59 4.79 -0.39 -0.56 -0.4 -1.9 -1.06 -1.68 -2.34 -2.46 -0.25 -0.39 -0.47 -1.54 0.38 -0.93 -4.47 -2.59 -3.74 -3.18 -2.79 -1.34 -0.86 -6.64 - -6.66 -5.73 -4.01 -4.87 -5.17 -4.98 -3.48 -5.0 -3.93 -4.96 -4.54 -3.72 -4.18 -3.52 -2.55 -2.34 -2.24 -5.84 -3.68 -4.23
LOC_Os02g33400.1 (LOC_Os02g33400)
1.81 0.4 1.08 -1.52 -1.21 4.37 0.01 0.06 1.08 -1.32 -1.0 0.02 -0.17 -0.87 -1.72 -1.58 1.64 -0.86 1.06 -1.04 -2.74 -2.95 -2.71 -3.0 -3.78 -1.54 -0.74 -2.88 -2.91 -2.58 -2.7 -2.02 -2.83 -4.24 -2.78 -2.62 -2.69 -2.65 -2.69 -4.25 -3.4 -3.44 -3.13 -2.12 -1.98 -1.33 -1.37 -1.2 -0.36
LOC_Os02g39764.1 (LOC_Os02g39764)
-1.44 -0.14 -0.88 2.36 2.74 4.71 -0.87 -1.12 -2.73 0.08 0.13 -4.03 -0.94 0.05 -1.74 -0.37 -2.79 -1.77 - -1.17 -7.32 -5.27 -6.2 -5.92 -2.68 -1.58 -0.26 -3.86 - - -3.78 -5.78 - - - - -2.84 - -4.04 - - - - -1.47 -3.14 - - -3.25 -
LOC_Os02g47080.1 (LOC_Os02g47080)
-7.12 -3.9 0.94 -2.22 -1.15 5.5 -6.16 -4.47 - -7.39 -5.63 -3.64 - - - - - -6.63 - - - -6.12 - -5.16 -2.75 -4.3 - - - - - - - - - - - - - - - - - -2.73 -1.32 -2.43 - - -
LOC_Os02g48116.1 (LOC_Os02g48116)
1.18 -0.01 -0.17 -0.91 -0.5 3.94 -0.29 -0.37 -0.08 -1.65 -1.14 0.5 0.14 -0.29 0.03 -0.07 0.76 -0.56 0.43 0.15 -1.01 -0.99 -1.03 -1.18 -3.19 -0.18 0.21 -0.95 -1.02 -1.69 -1.4 -0.69 -1.3 -1.55 -1.64 -1.24 -1.17 -1.67 -1.23 -1.51 -1.08 -1.06 -0.86 -0.38 -0.33 -0.62 -1.04 -0.87 -0.69
LOC_Os02g52270.1 (LOC_Os02g52270)
-0.96 -1.47 -0.21 -0.64 0.75 4.37 -1.11 -1.18 0.51 -1.4 -0.85 -1.39 -2.58 -2.27 -0.39 -0.14 -1.16 -1.42 -1.42 -0.51 -1.56 -1.04 -1.68 -1.3 -1.18 1.52 -0.23 -1.56 -1.55 -1.82 -1.96 -1.27 -1.48 -0.66 -1.1 -0.79 -1.46 -2.21 -1.9 -0.55 -0.57 -0.57 -0.25 -2.14 -1.39 -0.75 -0.23 -0.31 -0.52
LOC_Os03g05940.1 (LOC_Os03g05940)
0.58 2.16 0.37 -0.0 - 4.9 -0.98 -1.39 -0.9 -0.77 0.2 -3.36 -2.61 -1.19 - - -1.16 -2.36 - -2.02 - -5.54 - -5.65 -0.48 - - - - - - -1.67 - -1.24 - - - - -1.24 - -5.69 - - -1.78 -1.21 0.08 -0.09 0.63 -
-0.28 -0.54 1.05 -2.08 -1.04 4.68 0.09 -0.49 -1.2 -0.51 -0.04 0.26 0.06 -0.34 -1.45 -1.8 0.29 0.08 -0.79 -1.01 -2.72 -2.6 -2.63 -2.36 -2.85 -1.34 -0.99 -2.34 -2.56 -3.66 -2.96 -2.26 -3.42 -2.57 -2.58 -2.74 -3.15 -1.88 -2.15 -3.5 -2.49 -3.03 -2.57 -1.05 -1.11 -1.14 -0.8 -0.6 0.28
LOC_Os03g13984.1 (LOC_Os03g13984)
1.28 2.39 1.01 -0.64 -1.44 4.57 0.9 0.3 -1.69 -0.97 -0.17 -3.45 0.23 0.33 -4.56 - 1.96 -2.84 -1.83 -1.13 -4.75 -5.82 -5.81 -6.19 -0.75 -3.61 - -3.86 -5.73 -5.43 -4.95 -4.95 -4.53 - -5.6 -5.66 - - -3.77 -6.08 -4.62 -4.95 -4.26 -1.27 -6.31 -4.78 -2.01 -2.01 -2.75
LOC_Os03g30590.1 (LOC_Os03g30590)
-4.36 1.11 - -2.29 - 5.47 - - 0.61 - -3.69 -4.07 - - - - - -7.24 - -2.84 - - - - -1.26 - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os03g36320.1 (LOC_Os03g36320)
0.03 1.81 0.9 1.87 - 4.61 0.93 0.36 - -3.4 -1.93 -2.51 - 0.39 - - -1.01 -0.64 - -0.37 -4.51 - -5.17 -4.04 - 1.38 -1.07 - - - - - - - - - -0.83 - - -4.54 -3.7 - -1.96 0.77 -1.2 -0.13 - -1.58 -
LOC_Os03g42030.1 (LOC_Os03g42030)
0.25 1.49 -0.01 1.17 0.32 5.12 -1.18 -1.43 -0.07 - -3.06 - - - - 0.63 -2.14 -0.08 - -4.92 - - -4.0 -4.41 - - - - - - - - - - - - - - -0.72 -3.63 - - - -2.48 - - - - -
LOC_Os03g51760.1 (LOC_Os03g51760)
1.88 -0.21 0.41 -2.95 -0.51 4.79 -2.29 -3.47 -0.22 0.83 0.84 -5.18 -2.18 -1.25 -4.87 -4.04 1.25 -1.8 -0.31 -6.87 -6.59 -5.96 -5.92 -6.39 -5.79 0.49 -5.37 -4.65 -7.08 -5.9 -5.82 -5.13 -7.98 0.39 -4.39 -4.85 -6.45 -8.25 -8.2 -8.26 -5.89 -8.24 -6.58 -5.34 -3.36 -2.6 -0.6 -1.53 0.37
LOC_Os04g39070.1 (LOC_Os04g39070)
-0.03 1.27 -1.08 -2.36 0.15 5.42 -2.76 -4.93 -2.25 -4.58 -2.15 -4.34 - - - - -3.34 -6.12 - - - - -6.38 -6.7 - - - - - - - - - - - - - - - - - - - -5.96 -2.92 -3.35 - - -
LOC_Os04g39090.1 (LOC_Os04g39090)
0.75 0.1 0.13 -0.68 -0.31 3.46 0.1 0.16 0.28 -0.46 -0.32 0.73 -0.26 -0.39 0.02 -0.12 0.75 -0.67 -0.2 -0.24 -0.92 -0.93 -1.0 -1.0 -0.9 -0.24 0.07 -0.74 -0.97 -0.94 -1.06 -0.53 -0.99 -1.97 -1.18 -0.86 -1.19 -1.06 -1.09 -1.13 -0.74 -0.64 -0.37 -0.11 0.51 0.16 -0.48 -0.49 -0.36
LOC_Os04g40475.1 (LOC_Os04g40475)
0.9 1.78 0.04 -1.6 -0.91 3.89 0.83 0.87 0.63 0.25 0.5 -0.27 -0.62 -0.03 -2.78 - 1.98 -1.7 - -2.36 -7.67 - -6.52 -7.13 - - -4.05 - - - - -5.82 - - - - - - - - -6.06 - -6.65 -1.52 0.28 0.75 -0.56 1.23 2.54
LOC_Os04g46840.1 (LOC_Os04g46840)
-3.69 0.64 - -3.6 0.05 5.52 - - -3.31 - - - - - - - - -4.53 - - - -4.97 -5.68 -3.92 - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os04g47110.1 (LOC_Os04g47110)
-3.44 -1.6 -1.14 2.3 2.12 4.12 -0.63 -0.47 -3.6 -3.03 -1.29 -4.03 -2.09 -0.91 -0.46 -0.44 -5.08 -1.77 -2.21 -0.36 -3.67 -2.78 -3.87 -2.26 3.38 0.06 0.32 -3.83 - -3.31 -3.75 -2.99 -3.23 -2.26 - -2.26 -4.04 -2.16 -5.24 -2.85 -2.08 -2.88 -1.99 -1.65 -3.22 -3.74 -2.69 -3.45 -
1.75 -0.67 -0.23 -1.79 -0.49 4.82 -1.08 -1.65 -0.17 -3.22 -1.75 -1.46 -1.07 -0.51 -5.6 -5.39 2.04 -1.55 0.51 -4.42 -6.63 -6.22 -6.18 -6.39 -5.32 -5.03 -5.27 -5.94 -6.06 -7.19 -7.28 -6.65 -6.2 - - -6.76 -7.98 -7.11 -6.16 -7.78 -7.56 -7.22 -7.15 -3.23 -2.61 -0.49 -0.02 -0.15 1.17
LOC_Os05g35630.1 (LOC_Os05g35630)
0.04 1.14 -1.48 2.35 0.96 4.85 0.44 -0.07 -2.38 -1.58 -0.47 - -3.17 -3.27 - -1.08 -4.07 -2.12 - -0.58 -5.89 -5.15 - - - 0.91 0.14 - - - - - - - - - - - - - -3.68 -4.43 - -1.32 -1.69 -1.18 - - -
LOC_Os05g40590.1 (LOC_Os05g40590)
-0.69 2.52 -0.06 0.34 - 4.97 -0.81 -0.46 0.51 -0.95 -0.63 -0.93 - -1.77 - - -1.16 -2.76 - -0.11 -4.51 -2.51 - -1.05 - -0.85 - - - - - -1.67 - - - - - - - - - - - -0.28 -1.4 - - - -
LOC_Os05g46180.1 (LOC_Os05g46180)
-2.14 -1.26 0.96 0.17 -0.05 5.41 -2.89 -2.12 0.51 - -3.4 - - -5.45 - - -6.22 -7.68 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os06g37780.1 (LOC_Os06g37780)
-4.2 0.81 0.64 1.8 1.18 5.13 -0.69 -2.49 -1.06 - -2.47 - - - - - - - - -2.8 - -2.68 - - - 0.48 - - - - - -2.19 - - - - - - - - - -3.03 -1.92 -3.56 -0.48 -1.34 - - -
1.8 -0.27 -1.17 -3.82 0.07 4.64 -0.36 -1.15 0.6 -1.29 -0.51 -1.13 -1.18 -0.43 -7.28 -6.65 1.82 -1.08 0.27 -4.15 -6.27 -5.1 -5.98 -5.25 -4.85 -7.26 -4.43 -6.49 -6.03 -7.03 -6.48 -6.88 -7.25 -8.87 -9.06 -5.71 -6.9 -7.74 -5.54 -8.63 -7.73 -6.74 -7.47 -1.45 -0.48 0.42 0.0 -0.14 1.45
0.16 -0.73 1.23 -0.93 -2.59 5.32 -3.88 -3.61 -1.23 -6.67 -2.85 -9.07 -4.63 -3.45 -6.34 -3.35 1.02 -3.39 -0.85 -4.01 -9.99 -8.68 - -9.52 -6.22 -4.34 -4.38 - - - - -6.33 -7.46 - - - -7.59 - - - -10.38 - -9.46 -4.31 -3.82 -3.48 -4.65 -4.86 -2.05
LOC_Os08g06700.1 (LOC_Os08g06700)
-2.08 1.52 -0.42 -2.67 -1.22 5.08 -1.43 -1.9 2.09 -3.31 -2.68 -5.47 -1.41 -1.96 -0.26 -1.38 -4.27 -5.65 - -0.18 -9.13 - - -6.5 -3.68 -4.11 -3.64 - - - - -4.46 - - - - - - - -8.75 - - -7.57 0.06 -2.21 -3.5 -0.06 -1.86 -
LOC_Os08g06720.1 (LOC_Os08g06720)
-1.7 2.14 - 1.52 -2.3 4.81 -2.65 - 3.48 - -2.54 - - -0.43 - - -4.73 -5.69 - -7.08 - - - - -1.03 - - - - - - -4.22 - - - - - - - -6.19 - - - -6.22 -2.93 -2.95 - - -
LOC_Os08g35460.1 (LOC_Os08g35460)
0.76 2.37 -0.26 -1.65 -5.05 3.75 1.49 1.38 - 0.38 0.97 - -0.33 0.03 -3.01 - 2.54 0.47 - -0.43 -3.96 - - - - -1.88 -0.22 - - - - -3.72 -4.08 - -1.52 - - -4.36 -3.31 -3.98 -2.92 -3.61 -3.42 0.1 - -3.18 -0.27 0.36 1.8
LOC_Os09g04720.1 (LOC_Os09g04720)
-1.16 -0.68 1.36 -1.59 -1.4 4.5 -0.12 -0.47 -0.77 -0.44 0.31 0.09 -0.39 -0.71 -3.19 -2.51 0.07 -0.53 - -0.56 -2.66 -3.01 -3.05 -3.16 -2.61 -0.49 -0.11 -3.05 -2.72 -3.02 -2.56 -3.13 -3.25 -3.21 -2.42 -2.35 -2.27 -2.63 -2.47 -3.17 -2.32 -2.75 -2.36 -0.81 -0.31 -0.5 0.3 0.4 1.72
1.09 0.29 -0.19 -1.92 0.35 3.77 0.07 0.03 0.43 0.04 -0.03 -0.13 -0.95 -0.68 -0.55 -1.01 0.82 -0.58 0.42 -1.52 -2.03 -1.89 -2.08 -1.56 -3.42 0.55 -2.22 -1.76 -2.05 -2.03 -2.51 -2.25 -1.83 0.17 -0.49 -0.63 -0.26 -1.19 -1.64 -1.51 -0.93 -1.38 -0.98 -1.24 -0.43 -0.75 -0.0 0.97 0.97
LOC_Os10g06510.1 (LOC_Os10g06510)
1.63 1.36 -2.26 -0.13 -2.59 4.47 0.6 0.6 -4.57 1.72 0.78 -4.59 -1.44 -0.52 -0.97 -1.71 1.46 -0.12 -2.42 -1.16 -5.08 -6.8 -4.06 -4.93 -0.95 -1.69 -1.51 -5.56 -4.99 -4.1 -3.93 -6.25 - -1.26 -5.49 -2.84 - -5.04 -5.74 -5.33 -4.44 -4.86 -4.4 -1.07 -0.51 -0.71 -0.57 -1.33 -1.34
2.03 -0.88 0.32 -2.5 -1.0 4.56 -1.09 -1.99 -0.1 -2.75 -1.41 -1.49 -1.11 -0.11 - -6.24 1.99 -1.68 0.64 -8.52 -6.46 -5.73 -5.79 -5.99 - -8.47 -8.5 -5.03 -6.4 -8.39 -8.65 -7.29 -6.61 -6.97 - -5.79 - -6.73 -6.27 -10.75 - -8.19 -9.6 -3.39 -2.08 0.34 0.19 0.75 2.15
LOC_Os11g10600.1 (LOC_Os11g10600)
-0.73 0.02 -0.3 2.08 1.02 4.56 0.94 0.83 -0.86 -1.24 -0.64 -0.39 -0.7 0.66 -3.58 -2.99 -2.58 -1.68 -0.28 -1.08 -3.65 -1.41 -5.77 -5.23 -1.44 -0.43 -0.81 -4.13 -3.42 -1.75 -1.18 -2.16 -2.77 -3.31 -3.88 -3.72 -4.15 -5.95 -4.04 -2.68 -2.45 -1.91 -2.09 -1.7 -0.26 -1.19 -3.21 -4.6 -4.3
LOC_Os11g39850.1 (LOC_Os11g39850)
0.19 0.63 -0.75 -4.46 -1.24 5.25 -3.37 -4.35 0.43 -8.67 -5.83 -3.87 0.29 0.38 -4.09 - -1.46 -2.68 - -3.18 -4.72 -4.77 -5.14 -3.57 - -3.18 -3.79 -2.4 - - - -5.12 -2.8 -4.8 - -4.23 -3.64 - -3.18 -6.17 -4.79 -4.87 -3.27 -6.36 -1.95 -2.17 -3.0 -3.07 -0.96
1.6 -1.11 1.55 -1.19 -1.08 4.88 -1.27 -1.54 0.13 -4.43 -1.76 -2.09 -1.62 -0.92 -6.29 - 1.28 -2.23 0.25 -8.72 -7.39 -5.45 -6.19 -6.61 -6.12 -5.91 - - -7.46 - - -6.73 -6.26 - - -7.39 -7.49 - - -9.38 - -9.15 - -4.57 -2.49 -0.55 -0.31 -0.3 1.28
LOC_Os11g47770.1 (LOC_Os11g47770)
1.34 -0.85 -0.07 -3.13 -1.4 4.1 -0.81 -1.14 -0.13 -2.99 -0.81 -0.54 -1.68 -0.72 -2.97 -2.05 1.91 -1.72 2.42 -0.57 -6.66 -5.67 -6.67 -6.09 -6.1 -2.89 -3.28 -4.48 - -5.54 -7.21 -5.59 - - - -7.32 -6.27 - -5.38 -5.72 -5.67 -5.47 -5.57 0.19 0.68 0.8 0.76 0.38 2.23
1.49 -0.93 -0.39 -4.12 -1.27 4.56 -0.11 -0.75 0.12 -3.11 -0.99 -0.83 -0.96 -0.51 -2.94 -2.42 2.45 -0.87 -0.43 -2.13 -2.47 -2.77 -2.2 -2.56 -4.06 -3.38 -4.02 -2.55 -3.28 -2.13 -3.03 -2.36 -3.14 -2.59 -1.89 -1.18 -1.99 -1.79 -1.31 -1.95 -2.45 -2.56 -2.62 -2.21 -1.01 0.86 -1.12 -1.36 -0.45
LOC_Os12g36160.1 (LOC_Os12g36160)
-2.55 0.5 -4.48 -0.02 -1.05 5.38 -4.04 -5.62 -4.36 -5.86 -2.34 -2.42 -3.74 -2.77 - - -1.81 -4.4 - 1.09 - - -6.85 - - - -2.56 - - - - - - - - - - - - - - - - -6.7 -1.19 -1.62 - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.