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  5. LOC_Os09g39462.2

LOC_Os09g39462.2 (LOC_Os09g39462)


Aliases : LOC_Os09g39462

Description : no hits & (original description: none)


Gene families : OG0001257 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001257_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g39462.2

Target Alias Description ECC score Gene Family Method Actions
Adi_g019664 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g105950 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g50556 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06651 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene45992.t1 Aspi01Gene45992 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07508 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01025786001 No alias No description available 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0025.g009220 No alias not classified & original description: CDS=276-1655 0.03 OrthoFinder output from all 47 species
Zm00001e009475_P001 Zm00001e009475 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e033627_P001 Zm00001e033627 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
BP GO:0007031 peroxisome organization IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR001374 R3H_dom 77 123
IPR024771 SUZ 170 218
No external refs found!