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  5. LOC_Os09g32750.1

LOC_Os09g32750.1 (LOC_Os09g32750)


Aliases : LOC_Os09g32750

Description : Transcriptional activator FHA1 OS=Nicotiana tabacum (sp|q945p0|fha1_tobac : 177.0)


Gene families : OG0003588 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003588_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g32750.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g102812 No alias component *(FHA) of ISWI chromatin remodeling complex &... 0.02 OrthoFinder output from all 47 species
Pir_g03038 No alias component *(FHA) of ISWI chromatin remodeling complex &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000345 No alias component *(FHA) of ISWI chromatin remodeling complex &... 0.02 OrthoFinder output from all 47 species
Solyc09g059500.3.1 Solyc09g059500 FHA domain-containing protein FHA2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000253 FHA_dom 37 109
No external refs found!