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  5. LOC_Os09g31400.1

LOC_Os09g31400.1 (SLIM1, ATSLIM,...)


Aliases : SLIM1, ATSLIM, AtEIL3, EIL3, LOC_Os09g31400

Description : EIN3-type ethylene signal transducer. transcription factor (EIL)


Gene families : OG0000587 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000587_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g31400.1
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00216890 SLIM1, ATSLIM,... RNA biosynthesis.transcriptional activation.EIL... 0.02 OrthoFinder output from all 47 species
AMTR_s00119p00117410 EIL1, AtEIL1,... RNA biosynthesis.transcriptional activation.EIL... 0.03 OrthoFinder output from all 47 species
AT5G65100 No alias Ethylene insensitive 3 family protein 0.03 OrthoFinder output from all 47 species
Aob_g07348 EIL1, AtEIL1 EIL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11741 AtEIN3, EIN3 EIL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene08417.t1 EIL1, AtEIL1,... EIL-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene42961.t1 EIL1, AtEIL1,... EIL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.08G059300.1 EIL1, AtEIL1,... EIL-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
GSVIVT01025324001 SLIM1, ATSLIM,... RNA biosynthesis.transcriptional activation.EIL... 0.05 OrthoFinder output from all 47 species
Gb_03292 EIL1, AtEIL1 EIN3-type ethylene signal transducer. transcription factor (EIL) 0.02 OrthoFinder output from all 47 species
MA_52817g0010 AtEIN3, EIN3 EIN3-type ethylene signal transducer. transcription factor (EIL) 0.04 OrthoFinder output from all 47 species
MA_53004g0010 EIL1, AtEIL1 EIN3-type ethylene signal transducer. transcription factor (EIL) 0.02 OrthoFinder output from all 47 species
Mp7g02640.1 AtEIN3, EIN3 EIN3-type ethylene signal transducer. transcription factor (EIL) 0.02 OrthoFinder output from all 47 species
Nbi_g03659 EIL1, AtEIL1 EIL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g12994 EIL1, AtEIL1 EIL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g45654 AtEIN3, EIN3 EIL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29779 EIL1, AtEIL1 EIL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g009170.4.1 AtEIN3, EIN3,... EIN3-type ethylene signal transducer. transcription factor (EIL) 0.04 OrthoFinder output from all 47 species
Spa_g48718 AtEIN3, EIN3 EIL-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006957 EIN3 38 288
No external refs found!