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Aliases : LOC_Os09g24990
Description : Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana (sp|q9skz2|caf1g_arath : 398.0)
Gene families : OG0000833 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000833_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G10960 | No alias | Polynucleotidyl transferase, ribonuclease H-like... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g07025 | No alias | deadenylase component *(CAF1) of mRNA deadenylation... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g14907 | No alias | deadenylase component *(CAF1) of mRNA deadenylation... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g24034 | No alias | deadenylase component *(CAF1) of mRNA deadenylation... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g37509 | No alias | deadenylase component *(CAF1) of mRNA deadenylation... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g47204 | No alias | deadenylase component *(CAF1) of mRNA deadenylation... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g06045 | No alias | deadenylase component *(CAF1) of mRNA deadenylation... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene68835.t1 | Aspi01Gene68835 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene71512.t1 | Aspi01Gene71512 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0009.g011912 | No alias | not classified & original description: CDS=1-1008 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g08602 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g08818 | No alias | deadenylase component *(CAF1) of mRNA deadenylation... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.05G056100.1 | Ceric.05G056100 | deadenylase component *(CAF1) of mRNA deadenylation... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g02762 | No alias | deadenylase component *(CAF1) of mRNA deadenylation... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g00624 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g00957 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g03366 | No alias | deadenylase component *(CAF1) of mRNA deadenylation... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_19103 | No alias | deadenylase component CAF1 of CCR4-NOT complex | 0.03 | OrthoFinder output from all 47 species | |
| Len_g11620 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g17479 | No alias | deadenylase component *(CAF1) of mRNA deadenylation... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g03678 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g05220 | No alias | deadenylase component *(CAF1) of mRNA deadenylation... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g24939 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_2937g0010 | No alias | Probable CCR4-associated factor 1 homolog 7... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g09969 | No alias | deadenylase component *(CAF1) of mRNA deadenylation... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g10235 | No alias | deadenylase component *(CAF1) of mRNA deadenylation... | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g01805 | No alias | deadenylase component *(CAF1) of mRNA deadenylation... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g02703 | No alias | deadenylase component *(CAF1) of mRNA deadenylation... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g08887 | No alias | deadenylase component *(CAF1) of mRNA deadenylation... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g26043 | No alias | deadenylase component *(CAF1) of mRNA deadenylation... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g27312 | No alias | deadenylase component *(CAF1) of mRNA deadenylation... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g01521 | No alias | deadenylase component *(CAF1) of mRNA deadenylation... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g17936 | No alias | deadenylase component *(CAF1) of mRNA deadenylation... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g14365 | No alias | deadenylase component *(CAF1) of mRNA deadenylation... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0014.g006359 | No alias | deadenylase component *(CAF1) of mRNA deadenylation... | 0.03 | OrthoFinder output from all 47 species | |
| Smo84624 | No alias | Probable CCR4-associated factor 1 homolog 7... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g11164 | No alias | deadenylase component *(CAF1) of mRNA deadenylation... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g02569 | No alias | deadenylase component *(CAF1) of mRNA deadenylation... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| MF | GO:0005509 | calcium ion binding | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| No external refs found! |