LOC_Os09g20340.1 (LOC_Os09g20340)


Aliases : LOC_Os09g20340

Description : no hits & (original description: none)


Gene families : OG0000259 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g20340.1
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Adi_g053403 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g076957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06649 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32674 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene65197.t1 Aspi01Gene65197 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G064300.1 Ceric.03G064300 not classified & original description: pacid=50572356... 0.02 OrthoFinder output from all 47 species
Ceric.21G041700.1 Ceric.21G041700 not classified & original description: pacid=50603626... 0.02 OrthoFinder output from all 47 species
Dcu_g07102 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27593 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01006889001 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01023992001 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Lfl_g11019 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_1869g0010 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g13560 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35292 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g24378 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006218 No alias not classified & original description: CDS=798-3371 0.03 OrthoFinder output from all 47 species
Sam_g10002 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo437513 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc03g120140.3.1 Solyc03g120140 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g46265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003599_P001 Zm00001e003599 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR006867 DUF632 281 622
IPR006868 DUF630 1 59
No external refs found!