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Aliases : LOC_Os09g08890
Description : component mtRPL5 of large ribosomal subunit proteome
Gene families : OG0009865 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009865_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os09g08890.1 | |
| Cluster | HCCA: Cluster_24 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00127p00094990 | evm_27.TU.AmTr_v1... | 60S ribosomal protein L5, mitochondrial OS=Solanum tuberosum | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00251p00014110 | RPS14,... | Protein biosynthesis.organelle translation... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00370p00007710 | evm_27.TU.AmTr_v1... | 60S ribosomal protein L5, mitochondrial OS=Solanum tuberosum | 0.02 | OrthoFinder output from all 47 species | |
| AT2G07725 | No alias | Ribosomal L5P family protein | 0.08 | OrthoFinder output from all 47 species | |
| ATMG00210 | RPL5 | ribosomal protein L5 | 0.08 | OrthoFinder output from all 47 species | |
| Aev_g12839 | No alias | component *(uL5m) of large mitoribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_34381 | No alias | 60S ribosomal protein L5, mitochondrial OS=Oenothera... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g08344 | No alias | component *(uL5m) of large mitoribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Mp2g12110.1 | No alias | component mtRPL5 of large ribosomal subunit proteome | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g26173 | No alias | component *(uL5m) of large mitoribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g15215 | No alias | component *(uL5m) of large mitoribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000276 | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) | IEP | HCCA |
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| MF | GO:0003954 | NADH dehydrogenase activity | IEP | HCCA |
| MF | GO:0003955 | NAD(P)H dehydrogenase (quinone) activity | IEP | HCCA |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0006413 | translational initiation | IEP | HCCA |
| BP | GO:0006417 | regulation of translation | IEP | HCCA |
| BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| MF | GO:0008137 | NADH dehydrogenase (ubiquinone) activity | IEP | HCCA |
| BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009890 | negative regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
| BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010608 | post-transcriptional regulation of gene expression | IEP | HCCA |
| BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015453 | oxidoreduction-driven active transmembrane transporter activity | IEP | HCCA |
| BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | HCCA |
| MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | HCCA |
| MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | HCCA |
| BP | GO:0017148 | negative regulation of translation | IEP | HCCA |
| MF | GO:0030597 | RNA glycosylase activity | IEP | HCCA |
| MF | GO:0030598 | rRNA N-glycosylase activity | IEP | HCCA |
| BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | HCCA |
| CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | HCCA |
| BP | GO:0034248 | regulation of amide metabolic process | IEP | HCCA |
| BP | GO:0034249 | negative regulation of amide metabolic process | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| CC | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | IEP | HCCA |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
| MF | GO:0048038 | quinone binding | IEP | HCCA |
| BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
| BP | GO:0048523 | negative regulation of cellular process | IEP | HCCA |
| MF | GO:0050136 | NADH dehydrogenase (quinone) activity | IEP | HCCA |
| BP | GO:0051172 | negative regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | HCCA |
| BP | GO:0051248 | negative regulation of protein metabolic process | IEP | HCCA |
| MF | GO:0051287 | NAD binding | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| CC | GO:0098798 | mitochondrial protein-containing complex | IEP | HCCA |
| CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | HCCA |
| MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | HCCA |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:2000113 | negative regulation of cellular macromolecule biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |