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  5. LOC_Os08g44850.1

LOC_Os08g44850.1 (LOC_Os08g44850)


Aliases : LOC_Os08g44850

Description : no hits & (original description: none)


Gene families : OG0004768 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004768_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g44850.1
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
Adi_g109447 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene23567.t1 Aspi01Gene23567 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G022200.1 Ceric.23G022200 not classified & original description: pacid=50610122... 0.01 OrthoFinder output from all 47 species
Ehy_g15017 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g27322 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g31927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os09g39770.1 LOC_Os09g39770 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Lfl_g21266 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g21514 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e009457_P001 Zm00001e009457 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Zm00001e033544_P002 Zm00001e033544 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 7 104
No external refs found!