Aliases : WIP2, NTT, LOC_Os08g39390
Description : C2H2 zinc finger transcription factor
Gene families : OG0001814 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001814_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os08g39390.1 | |
Cluster | HCCA: Cluster_78 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00093p00164790 | WIP6, DOT5,... | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00114p00100630 | WIP3,... | Zinc finger protein WIP3 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
AT1G51220 | WIP5 | WIP domain protein 5 | 0.02 | OrthoFinder output from all 47 species | |
AT3G20880 | WIP4 | WIP domain protein 4 | 0.03 | OrthoFinder output from all 47 species | |
Aev_g05354 | WIP2, NTT | C2H2 subclass WIP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
Aob_g01096 | WIP2, NTT | C2H2 subclass WIP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
Aop_g29352 | WIP4 | C2H2 subclass WIP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.24G008900.1 | WIP2, NTT,... | C2H2 subclass WIP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g38686 | WIP5 | C2H2 subclass WIP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01032076001 | WIP2, NTT | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01033329001 | WIP2, NTT | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.03 | OrthoFinder output from all 47 species | |
Gb_05632 | WIP2, NTT | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os06g40960.1 | WIP2, NTT, LOC_Os06g40960 | C2H2 zinc finger transcription factor | 0.01 | OrthoFinder output from all 47 species | |
MA_3555g0010 | WIP6, DOT5 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
Solyc06g074360.4.1 | WIP3, Solyc06g074360 | C2H2 zinc finger transcription factor | 0.05 | OrthoFinder output from all 47 species | |
Tin_g14883 | WIP5 | C2H2 subclass WIP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e003504_P001 | WIP2, NTT, Zm00001e003504 | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e009663_P001 | WIP6, DOT5,... | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e024373_P001 | WIP2, NTT, Zm00001e024373 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e026959_P001 | WIP5, Zm00001e026959 | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e033781_P001 | WIP6, DOT5,... | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
MF | GO:0004866 | endopeptidase inhibitor activity | IEP | HCCA |
MF | GO:0004869 | cysteine-type endopeptidase inhibitor activity | IEP | HCCA |
BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
MF | GO:0008171 | O-methyltransferase activity | IEP | HCCA |
BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
MF | GO:0030414 | peptidase inhibitor activity | IEP | HCCA |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
MF | GO:0061134 | peptidase regulator activity | IEP | HCCA |
MF | GO:0061135 | endopeptidase regulator activity | IEP | HCCA |
BP | GO:0065007 | biological regulation | IEP | HCCA |
BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |