Heatmap: Cluster_78 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
LOC_Os01g13920.1 (LOC_Os01g13920)
-0.76 1.82 -1.79 - - - - - - 0.56 -1.45 - - -1.95 - - -2.35 - 5.09 -3.1 - -3.48 -3.57 - - -0.97 2.07 - - -0.32 -0.49 -2.48 - - -0.49 - - - - -2.88 -2.67 -1.55 -3.21 - - - - - -
LOC_Os01g21390.1 (LOC_Os01g21390)
-5.23 -0.54 -5.23 - - -3.46 - - -4.4 - -0.81 - -2.58 - - -2.38 -3.35 -3.93 5.36 -1.79 -2.17 -4.6 -2.26 -3.94 - -1.35 -3.71 - -0.18 -2.95 -1.21 -3.35 - -3.11 - - - - -1.12 -2.16 -1.94 -2.15 -1.3 - - -1.99 -3.64 0.23 -5.53
LOC_Os01g49640.1 (LOC_Os01g49640)
-4.79 -3.43 -3.86 -7.13 - - -6.05 -4.85 -3.82 -4.15 -2.75 -4.93 -4.83 -3.26 - - -2.68 -6.72 5.5 -6.44 -10.1 -9.83 -10.23 -10.0 - - - - - - - -8.33 - - - - - - - - -10.33 - - -4.26 -2.5 -0.71 -3.08 -4.11 0.88
-7.09 -0.71 -6.72 -6.92 - - -7.77 -5.43 -4.9 -4.09 -1.67 - -5.3 -5.35 -3.44 -3.33 -5.38 -7.42 5.02 -4.44 - - -7.06 -6.79 -2.22 - - - - - - -6.48 - - - - - - - -7.95 -8.36 - -20.29 -0.19 -0.3 0.14 -1.44 -0.07 3.43
-7.6 -3.91 -4.94 -6.77 - -2.76 -8.77 -10.76 -8.08 -5.94 -2.82 -2.51 - -3.81 - - -4.72 -9.21 5.02 -14.49 -11.0 -11.25 -10.75 -9.77 - - - - - - - -6.65 - - - - - - - - - - - -2.61 -1.38 0.64 -0.43 -0.49 3.6
LOC_Os02g31840.1 (LOC_Os02g31840)
-4.94 -0.69 - - - - -3.06 - -4.66 -1.74 -0.45 -2.57 - -1.09 - - -2.74 -7.2 5.35 -9.71 - - -6.38 - - 0.77 -0.89 - - - - - - - - - - - - - - - - -1.58 -0.04 1.07 - - -
-12.29 -4.34 -8.84 -10.56 - -5.22 -8.86 - -7.34 -3.55 -1.6 -2.71 -8.47 -4.21 - - -3.38 -9.61 5.19 - - - - -10.16 - -8.61 - - - - - -8.85 - - - - - - - - - - - -2.97 -1.35 0.03 -1.73 -1.4 3.23
LOC_Os03g01720.1 (LOC_Os03g01720)
-2.4 -1.75 -1.23 -2.86 -5.77 0.99 -1.37 -0.98 -0.24 -3.43 -1.55 1.05 1.12 0.85 - -3.77 0.52 1.0 4.39 -3.6 -1.49 -0.09 -1.81 -0.54 -4.74 -4.18 -2.94 -0.82 -1.29 -0.93 -1.61 -1.26 -1.93 -3.03 -1.24 -1.27 -1.08 -1.64 -1.39 -5.77 -4.98 -4.75 -4.09 -1.44 -0.09 -1.62 -2.72 -3.25 1.98
LOC_Os03g07650.1 (LOC_Os03g07650)
- 0.28 - - - - - - - -1.77 -0.92 - - - - - - -5.0 5.54 - - - - - - - - - - - - - - - - - - - - - - - - - - -0.92 - - -
LOC_Os03g29244.1 (LOC_Os03g29244)
-1.45 -1.18 -1.19 - - - -1.09 -1.98 - -3.55 -0.13 - - -1.45 - - -4.52 -2.15 5.34 -1.1 - -4.75 - - - - - - - - - - - - - - - - - - - - - -1.63 - 1.06 0.58 - -1.48
-2.54 -0.79 -3.21 -2.09 -3.41 -4.23 -6.89 -5.67 0.3 -5.24 -1.63 -5.65 -1.82 -0.2 - - 2.72 -2.18 5.24 -4.49 -9.68 -2.45 -9.72 -9.43 -4.24 - - -5.52 - - - - - - - - - - - -8.14 -6.33 -6.06 -8.46 -5.97 -3.56 -6.24 - - -
LOC_Os04g06244.1 (LOC_Os04g06244)
-4.96 -0.48 -1.64 - - - - - -3.84 - -7.02 -2.45 -5.02 - - - - 1.07 5.32 -4.62 -1.41 - -3.1 -5.44 0.39 - - -1.65 - - -0.61 -2.46 -1.63 -3.17 -2.9 -1.22 -0.97 -0.95 -2.63 - -7.14 - - -5.83 - -2.28 - -4.18 -
LOC_Os04g34150.1 (LOC_Os04g34150)
-1.88 -0.03 - - - - - -4.68 -2.33 - -5.23 2.33 - -1.38 - - - - 5.08 - - - - - - - - - - - - - - - - - - - - - -4.82 - - - 0.9 -0.68 2.51 - -
LOC_Os04g38250.1 (LOC_Os04g38250)
-0.27 0.76 -3.99 -4.81 -0.38 -3.12 -4.58 -4.27 -1.91 -3.96 -2.57 - -5.1 - 1.76 2.68 -0.74 -0.33 4.94 -0.7 -7.0 -7.55 -5.67 -3.0 -0.48 -2.04 -1.63 - - - - -5.68 - - - -3.79 -3.65 - - -6.38 -5.0 -4.9 -3.5 -2.89 -1.97 -3.84 -3.24 -4.4 -
LOC_Os04g46630.1 (LOC_Os04g46630)
-4.56 -3.9 -7.01 -7.83 -3.82 -6.37 -1.74 -2.1 -7.51 -3.63 -1.21 0.47 0.47 1.91 - - -3.37 0.86 5.08 - -5.49 -5.47 -5.87 -4.84 - - - -4.81 -5.98 -4.89 - -6.88 -6.31 - - -5.58 -5.64 -4.78 -6.03 - - - - -2.29 -1.21 -0.11 -0.12 -2.32 1.32
LOC_Os04g46850.1 (LOC_Os04g46850)
- -1.28 - - - -1.8 - - 0.41 -3.26 -4.26 -0.9 - - - - -2.08 -5.9 5.3 - - - - - - - - -0.2 - - - - - - - - - - - - - - - -2.75 -1.53 -0.09 - - 2.15
-2.56 -1.72 -2.49 -5.23 -6.65 1.84 -2.32 -2.92 -2.5 -2.37 -2.53 -4.62 -3.97 -3.53 -6.65 - -1.52 -5.83 5.37 -3.86 -10.29 -9.07 -9.41 -10.28 -2.83 -5.36 -5.97 - - -7.52 -5.69 -5.6 - -7.36 - - - -7.0 -7.95 -8.95 -8.84 - - -4.15 -3.32 -2.84 -0.59 -2.3 -1.03
-9.87 -3.28 - -6.79 - - -6.39 -4.86 - -7.87 -5.28 -1.55 - 0.63 - - -4.1 -5.71 5.47 - - -8.7 - -10.03 - -6.1 - - - - - - - - - - - - - - - - - -3.39 -3.76 -3.46 -1.43 -3.37 0.75
LOC_Os05g45460.1 (LOC_Os05g45460)
-10.65 -7.22 - - - - -7.53 -7.01 - -3.05 -2.46 -3.08 -7.74 -3.06 - - -5.1 -8.73 5.35 -13.08 - -11.91 - -10.44 -7.03 - - - - - - -10.22 - - - - - - - - - - - -2.89 0.21 1.8 -4.05 -5.54 1.5
LOC_Os05g45480.1 (LOC_Os05g45480)
-7.78 -4.16 - - -6.8 - - - - -6.77 -2.55 -6.25 - - - - -5.55 -9.42 5.27 - - - - - - - - - - - - -8.44 - - - - - - - - - - - -3.54 -2.6 -0.53 -1.82 -1.69 3.12
LOC_Os06g13280.1 (LOC_Os06g13280)
-6.09 -1.16 -2.53 - - - - -9.8 0.33 -5.84 -0.38 1.47 -2.99 -2.5 - - -7.36 -1.25 5.41 -6.74 -7.24 -3.66 -8.58 -4.22 -3.72 - - -6.36 - - -6.86 -8.5 - - - - -6.47 -4.48 -6.77 - -7.65 -9.12 - -8.86 - -6.04 -5.23 - -
-3.53 -2.48 -5.99 - - -6.48 -7.17 -6.08 -4.88 -5.05 -2.77 -3.81 -7.32 -3.85 - - -3.39 -5.07 5.51 -10.87 -5.97 -5.31 -6.58 -5.94 -4.79 -8.18 - -4.92 -6.06 -4.7 -5.76 -6.78 -7.99 - -5.77 -8.04 -5.68 -5.09 -5.73 - - - - -3.34 -1.81 -0.8 -3.69 -4.49 0.29
LOC_Os06g40870.1 (LOC_Os06g40870)
-9.54 -5.79 -10.59 -8.46 -9.29 -8.02 -7.9 -9.31 -7.58 -5.18 -3.45 -5.59 -7.56 -5.27 - - -5.53 -6.22 5.38 -11.93 -11.14 -11.21 - -10.59 - - - -7.45 - - - - - - - - - - - - - - - -4.96 -4.16 -2.47 -1.91 -0.93 2.63
LOC_Os06g42754.1 (LOC_Os06g42754)
-3.09 -2.71 -6.86 -8.52 - -8.53 -3.65 -3.44 -3.18 -3.97 -2.29 -0.58 -3.53 -3.45 -4.46 -6.04 -2.12 -4.24 5.07 -3.19 -6.47 -4.61 -6.29 -5.04 -5.36 -2.99 -3.78 -5.22 -5.14 -4.7 -7.47 -5.37 -6.37 -7.67 -5.99 -5.62 -5.44 -4.87 -6.17 -6.64 -6.29 -6.24 -5.8 -3.16 -1.26 1.12 -1.97 -1.55 3.23
-3.65 -0.46 -3.19 -3.4 -3.64 -0.71 -3.09 -2.62 -6.72 -2.47 -0.63 -1.78 -3.27 -2.29 - - -1.83 -4.84 5.25 -2.87 -5.44 -6.31 -5.52 -5.63 -5.06 -3.45 -3.09 -3.6 -7.88 -4.36 -4.73 -5.72 -6.13 -6.42 -5.68 -5.53 -6.71 -7.06 -5.61 -6.43 -6.29 -6.12 -6.23 -1.17 0.62 1.33 -0.49 -2.4 0.08
LOC_Os07g09840.1 (LOC_Os07g09840)
-0.87 1.45 - - - -0.61 -1.87 - -1.02 - -2.84 -3.97 - - - - -4.16 -5.38 5.46 -5.31 -24.7 - - - - - - - - - - - - - - - - - - -5.84 - - - - - - - - -
LOC_Os07g18750.1 (LOC_Os07g18750)
-0.97 -2.27 -7.25 -10.72 -6.98 -7.84 -7.48 -5.65 0.33 -3.81 -2.82 -1.4 -3.67 -1.66 - - -1.69 1.05 5.22 -3.87 -5.59 -4.2 -4.68 -4.2 -3.23 - - -5.28 -6.39 -6.63 -6.0 -7.24 -6.27 -7.96 -7.16 -6.06 -5.41 -6.38 -8.55 - - - - -1.11 -0.09 1.25 0.92 -3.51 -8.18
-5.76 -0.69 - - - - - - 1.12 - -4.53 - - -4.05 - - 1.99 - 5.29 -10.18 - - - - - - - - - - - - - - - - - - - - - - - -4.55 -2.6 0.3 0.64 - -
LOC_Os08g07070.1 (LOC_Os08g07070)
-5.72 -3.63 - - - -3.44 -3.99 -7.05 - -1.04 -1.82 -0.97 - -2.9 -0.71 -0.07 -6.18 -4.23 5.34 -3.0 -3.41 -7.9 - - - -1.87 -3.02 - - -3.85 - -5.75 -2.59 -3.31 - -2.25 - -2.48 -3.31 -1.89 -1.02 -0.43 0.33 -3.2 -4.47 -1.78 -2.3 -1.92 -4.22
LOC_Os08g07180.1 (UGT85A4)
-7.32 -0.83 - - - - - - -1.58 - -2.76 - - - - - - -0.91 4.85 - - - - - -1.18 - - - - - - - - - - - - - - - - - - -0.56 - -0.57 1.78 1.74 3.33
-4.15 -1.16 - -0.11 -0.78 -3.58 -3.69 -2.85 0.11 -6.11 -2.55 -3.12 -0.44 0.4 -5.27 - 2.08 -0.34 5.15 -7.81 -5.12 -5.39 -5.49 -4.46 0.09 -6.61 -5.55 -5.39 -5.42 -6.03 -6.02 - -5.34 -5.87 -6.31 -3.92 - - -6.28 -7.34 - - - -4.53 -2.36 -2.44 -3.83 - -0.52
LOC_Os09g27910.1 (LOC_Os09g27910)
-1.71 0.21 -2.43 - - -4.51 -4.75 - -6.1 -6.81 -1.76 -4.57 -1.82 -2.48 - - -4.75 -2.55 5.13 -4.75 - - - - -3.28 - - - - - - -7.48 - - - - - - - - - - - -2.2 -0.51 0.13 -1.51 -0.6 3.01
LOC_Os10g08280.1 (LOC_Os10g08280)
-6.04 -0.55 -5.25 -6.13 -5.72 -3.9 -7.33 -7.32 -3.61 -5.98 -1.9 -3.32 - -1.97 - - -2.32 -6.91 4.87 -6.75 - - - - - - - - - -4.12 - - - - - - - - - -7.57 - -6.86 - -0.77 -0.94 -0.11 1.27 -0.92 3.69
-8.68 -3.53 -9.3 -6.0 -3.79 2.06 -5.43 - -3.63 -1.2 -1.39 -1.86 -6.95 -1.7 - - -2.76 -10.23 5.27 -6.25 -9.29 -9.72 -10.2 -9.35 - -7.08 - -6.8 - - - -6.13 - - - - - - - -10.08 - -8.48 - -4.28 -1.53 -0.73 -0.58 -2.61 1.4
LOC_Os12g03940.1 (LOC_Os12g03940)
-2.29 2.11 - - - - - - - - -3.02 - - - - - - - 5.37 - - - - - - - - - - - - 1.6 - - - - - - - - - - - - - - - - -
LOC_Os12g27025.1 (LOC_Os12g27025)
-5.43 -0.3 - - - - - - - - -2.04 - 1.02 1.98 - - - 0.42 4.97 - - - - - - - - - - - - - - - - - - - - - - - - 1.05 -1.08 1.21 - - 2.14
LOC_Os12g30940.1 (LOC_Os12g30940)
-7.81 0.47 - -5.75 -2.26 -4.45 -2.51 -0.96 -3.77 - -4.71 - - - - - - -1.98 5.47 - -6.05 - -5.86 - - - - - - - - - - - - - -2.08 -1.47 - - - - - - -3.3 0.19 -3.29 - -
LOC_Os12g32390.1 (LOC_Os12g32390)
-3.4 -2.01 -1.19 -9.28 - - -0.19 1.15 -3.85 -2.76 -1.23 -2.26 -0.22 0.02 -3.4 -3.67 -2.74 -1.05 5.16 -3.78 - -5.85 - -6.1 -3.05 -5.3 -6.33 - - - - - - - - - - - - - -10.59 - - -4.43 1.34 1.37 -1.91 -2.77 -3.21
LOC_Os12g35050.1 (LOC_Os12g35050)
-4.67 -2.46 -5.32 - - 2.59 - - -4.49 - -3.88 - -2.67 - - -2.47 -3.44 -4.01 5.27 -1.87 -3.12 -4.68 -2.82 -4.03 - - -3.79 - -3.04 -3.04 -1.3 -3.44 - -3.2 - - - - - -3.52 -3.17 -2.83 -2.24 - - -2.08 -3.72 0.14 -5.61
LOC_Os12g40000.1 (LOC_Os12g40000)
-1.84 0.68 - - - - - - 0.08 - - - - - - - - - 5.53 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os12g40090.1 (LOC_Os12g40090)
-1.74 -0.43 -4.44 -4.29 - 1.81 -3.75 -5.33 2.41 -6.57 -3.05 0.54 -1.56 0.69 - - 2.12 -2.0 4.86 -7.55 -6.29 -3.69 - -4.57 - - - - - - - -3.45 - - - -3.1 - - - - - - - -5.44 -1.28 -1.75 - - -0.7

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.