LOC_Os08g36320.1 (GAD, GAD1, LOC_Os08g36320)

Aliases : GAD, GAD1, LOC_Os08g36320

Description : glutamate decarboxylase

Gene families : OG0000690 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000690_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os08g36320.1

Target	Alias	Description	ECC score	Gene Family Method
AT2G02000	GAD3	glutamate decarboxylase 3	0.02	OrthoFinder output from all 47 species
AT2G02010	GAD4	glutamate decarboxylase 4	0.03	OrthoFinder output from all 47 species
AT5G17330	GAD, GAD1	glutamate decarboxylase	0.02	OrthoFinder output from all 47 species
Aev_g09604	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g38116	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g08081	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene69536.t1	GAD, GAD1,...	glutamate decarboxylase *(GAD) & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g10779	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g15377	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os03g13300.1	GAD, GAD1, LOC_Os03g13300	glutamate decarboxylase	0.03	OrthoFinder output from all 47 species
Len_g20416	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Len_g28758	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g30487	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g07461	GAD2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g09194	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g09361	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g06503	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g29781	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g38409	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g002925	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: CDS=1-1701	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007078	GAD2	glutamate decarboxylase *(GAD) & original description:...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020087	GAD4	glutamate decarboxylase *(GAD) & original description:...	0.02	OrthoFinder output from all 47 species
Sam_g17192	No alias	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g17193	No alias	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Solyc01g005000.3.1	GAD4, Solyc01g005000	glutamate decarboxylase	0.03	OrthoFinder output from all 47 species
Solyc03g098240.3.1	GAD, GAD1, Solyc03g098240	glutamate decarboxylase	0.03	OrthoFinder output from all 47 species
Solyc04g025530.3.1	GAD4, Solyc04g025530	glutamate decarboxylase	0.03	OrthoFinder output from all 47 species
Spa_g12089	GAD4	glutamate decarboxylase *(GAD) & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g12090	GAD4	glutamate decarboxylase *(GAD) & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
MF	GO:0016831	carboxy-lyase activity	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	IEA	Interproscan
MF	GO:0019842	vitamin binding	None	Extended
MF	GO:0030170	pyridoxal phosphate binding	IEA	Interproscan
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
MF	GO:0070279	vitamin B6 binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002129	PyrdxlP-dep_de-COase	33	322

External Links

No external refs found!

LOC_Os08g36320.1 (GAD, GAD1, LOC_Os08g36320)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation