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  5. LOC_Os08g23930.1

LOC_Os08g23930.1 (LOC_Os08g23930)


Aliases : LOC_Os08g23930

Description : Protein EMSY-LIKE 3 OS=Arabidopsis thaliana (sp|f4k2f0|eml3_arath : 331.0)


Gene families : OG0001561 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001561_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g23930.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g10885 No alias histone H3K36 methylation reader *(EML) & original... 0.03 OrthoFinder output from all 47 species
Ala_g18914 No alias histone H3K36 methylation reader *(EML) & original... 0.04 OrthoFinder output from all 47 species
Aop_g11413 No alias histone H3K36 methylation reader *(EML) & original... 0.02 OrthoFinder output from all 47 species
Aop_g17440 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g16007 No alias histone H3K36 methylation reader *(EML) & original... 0.02 OrthoFinder output from all 47 species
Ceric.21G075800.1 Ceric.21G075800 histone H3K36 methylation reader *(EML) & original... 0.09 OrthoFinder output from all 47 species
Dcu_g03954 No alias histone H3K36 methylation reader *(EML) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g16668 No alias histone H3K36 methylation reader *(EML) & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01029959001 No alias Protein EMSY-LIKE 1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Len_g11197 No alias histone H3K36 methylation reader *(EML) & original... 0.03 OrthoFinder output from all 47 species
MA_89637g0010 No alias Protein EMSY-LIKE 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pir_g10172 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c16_11440V3.1 Pp3c16_11440 Emsy N Terminus (ENT)/ plant Tudor-like... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0136.g022399 No alias histone H3K36 methylation reader *(EML) & original... 0.02 OrthoFinder output from all 47 species
Sam_g28022 No alias histone H3K36 methylation reader *(EML) & original... 0.02 OrthoFinder output from all 47 species
Smo446942 No alias Protein EMSY-LIKE 3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Spa_g07830 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e009307_P002 Zm00001e009307 Protein EMSY-LIKE 3 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Zm00001e010070_P003 Zm00001e010070 Protein EMSY-LIKE 3 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Zm00001e022216_P004 Zm00001e022216 Protein EMSY-LIKE 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e033656_P003 Zm00001e033656 Protein EMSY-LIKE 3 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009581 detection of external stimulus IEP HCCA
BP GO:0009582 detection of abiotic stimulus IEP HCCA
BP GO:0009583 detection of light stimulus IEP HCCA
BP GO:0009584 detection of visible light IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
BP GO:0018298 obsolete protein-chromophore linkage IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051606 detection of stimulus IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005491 ENT_dom 54 121
No external refs found!