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  5. LOC_Os08g23100.1

LOC_Os08g23100.1 (LOC_Os08g23100)


Aliases : LOC_Os08g23100

Description : no description available(sp|q0j6h8|cyl3_orysj : 502.0)


Gene families : OG0004034 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004034_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g23100.1
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
Smo84519 No alias No description available 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004061 arylformamidase activity IEA Interproscan
BP GO:0019441 tryptophan catabolic process to kynurenine IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0097526 spliceosomal tri-snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR007325 KFase/CYL 58 212
No external refs found!