LOC_Os08g13840.2 (ATWRKY11, WRKY11,...)

Aliases : ATWRKY11, WRKY11, LOC_Os08g13840

Description : transcription factor (WRKY)

Gene families : OG0000132 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000132_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os08g13840.2
Cluster	HCCA: Cluster_17

Target	Alias	Description	ECC score	Gene Family Method
AT3G58710	ATWRKY69, WRKY69	WRKY DNA-binding protein 69	0.04	OrthoFinder output from all 47 species
Adi_g005501	MEE24, AtWRKY35, WRKY35	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Adi_g054269	WRKY21	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g098361	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Aev_g02296	MEE24, AtWRKY35, WRKY35	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g10571	MEE24, AtWRKY35, WRKY35	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Als_g01014	MEE24, AtWRKY35, WRKY35	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g14346	WRKY14, AR411, ATWRKY14	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g17785	WRKY21	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0006.g010291	MEE24, AtWRKY35, WRKY35	WRKY-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Azfi_s0250.g060244	ATWRKY65, WRKY65	WRKY-type transcription factor & original description: CDS=1-1050	0.06	OrthoFinder output from all 47 species
Cba_g08446	WRKY74, ATWRKY74	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.07G043200.1	WRKY21, Ceric.07G043200	WRKY-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.09G022800.1	MEE24, AtWRKY35,...	WRKY-type transcription factor & original description:...	0.05	OrthoFinder output from all 47 species
Ceric.09G022900.1	ATWRKY69,...	WRKY-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.10G040600.1	MEE24, AtWRKY35,...	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.33G025500.1	WRKY17,...	WRKY-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Dac_g37697	MEE24, AtWRKY35, WRKY35	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os01g54600.1	ATWRKY69,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Mp3g00010.1	ATWRKY11, WRKY11	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Nbi_g11340	WRKY21	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g27276	ATWRKY7, WRKY7	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g30949	WRKY39, ATWRKY39	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g33144	MEE24, AtWRKY35, WRKY35	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g40202	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e008447_P002	ATWRKY11,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e014245_P001	ATWRKY27,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e019908_P001	ATWRKY69,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0016043	cellular component organization	IEP	HCCA
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	HCCA
MF	GO:0030599	pectinesterase activity	IEP	HCCA
BP	GO:0042545	cell wall modification	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071555	cell wall organization	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR018872	Zn-cluster-dom	193	239
IPR003657	WRKY_dom	243	299

External Links

No external refs found!

LOC_Os08g13840.2 (ATWRKY11, WRKY11,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation