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  5. LOC_Os08g09810.1

LOC_Os08g09810.1 (LOC_Os08g09810)


Aliases : LOC_Os08g09810

Description : transcription factor (WRKY)


Gene families : OG0005372 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005372_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g09810.1

Target Alias Description ECC score Gene Family Method Actions
LOC_Os08g09840.1 LOC_Os08g09840 Zinc finger BED domain-containing protein RICESLEEPER 2... 0.06 OrthoFinder output from all 47 species
LOC_Os08g09880.1 LOC_Os08g09880 Zinc finger BED domain-containing protein RICESLEEPER 2... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025525 hAT-like_transposase_RNase-H 633 731
IPR008906 HATC_C_dom 778 860
IPR003657 WRKY_dom 66 121
IPR003656 Znf_BED 242 285
No external refs found!