1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os08g06430.1

LOC_Os08g06430.1 (LOC_Os08g06430)


Aliases : LOC_Os08g06430

Description : non-core component NduFS6 of NADH dehydrogenase


Gene families : OG0005926 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005926_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g06430.1
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
Adi_g007903 No alias non-core component *(NDUFS6/13kDa) of NADH dehydrogenase... 0.03 OrthoFinder output from all 47 species
Adi_g050677 No alias non-core component *(NDUFS6/13kDa) of NADH dehydrogenase... 0.03 OrthoFinder output from all 47 species
Cba_g02908 No alias non-core component *(NDUFS6/13kDa) of NADH dehydrogenase... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021462.40 No alias Cellular respiration.oxidative phosphorylation.NADH... 0.05 OrthoFinder output from all 47 species
Cre03.g178250 No alias Cellular respiration.oxidative phosphorylation.NADH... 0.06 OrthoFinder output from all 47 species
Gb_15747 No alias non-core component NduFS6 of NADH dehydrogenase 0.06 OrthoFinder output from all 47 species
Len_g05846 No alias non-core component *(NDUFS6/13kDa) of NADH dehydrogenase... 0.04 OrthoFinder output from all 47 species
Mp3g07920.1 No alias non-core component NduFS6 of NADH dehydrogenase 0.07 OrthoFinder output from all 47 species
Nbi_g02528 No alias non-core component *(NDUFS6/13kDa) of NADH dehydrogenase... 0.04 OrthoFinder output from all 47 species
Pp3c23_13320V3.1 Pp3c23_13320 NADH-ubiquinone oxidoreductase-related 0.02 OrthoFinder output from all 47 species
Ppi_g55898 No alias non-core component *(NDUFS6/13kDa) of NADH dehydrogenase... 0.02 OrthoFinder output from all 47 species
Solyc03g097010.3.1 Solyc03g097010 non-core component NduFS6 of NADH dehydrogenase 0.04 OrthoFinder output from all 47 species
Spa_g00505 No alias non-core component *(NDUFS6/13kDa) of NADH dehydrogenase... 0.02 OrthoFinder output from all 47 species
Zm00001e021694_P001 Zm00001e021694 non-core component NduFS6 of NADH dehydrogenase 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0097526 spliceosomal tri-snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR019401 Znf_CHCC 69 111
No external refs found!