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  5. LOC_Os07g46670.2

LOC_Os07g46670.2 (ERD15, LSR1, CID1,...)


Aliases : ERD15, LSR1, CID1, LOC_Os07g46670

Description : no hits & (original description: none)


Gene families : OG0001062 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001062_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g46670.2

Target Alias Description ECC score Gene Family Method Actions
AT2G41430 ERD15, LSR1, CID1 dehydration-induced protein (ERD15) 0.07 OrthoFinder output from all 47 species
AT4G14270 No alias BEST Arabidopsis thaliana protein match is:... 0.03 OrthoFinder output from all 47 species
Adi_g087753 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g102461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g02873 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g20821 ERD15, LSR1, CID1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g17969 ERD15, LSR1, CID1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09490 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55316.t1 ERD15, LSR1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g00232 ERD15, LSR1, CID1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.34G004400.1 ERD15, LSR1,... not classified & original description: pacid=50623837... 0.03 OrthoFinder output from all 47 species
Dac_g01286 ERD15, LSR1, CID1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g38535 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g25425 ERD15, LSR1, CID1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_417026g0010 ERD15, LSR1, CID1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g36969 ERD15, LSR1, CID1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g47776 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015156 No alias not classified & original description: CDS=1-333 0.04 OrthoFinder output from all 47 species
Solyc10g079820.2.1 ERD15, LSR1,... Protein EARLY RESPONSIVE TO DEHYDRATION 15... 0.03 OrthoFinder output from all 47 species
Spa_g53645 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e031500_P001 ERD15, LSR1,... no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e035777_P001 ERD15, LSR1,... no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Zm00001e038193_P002 ERD15, LSR1,... no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Zm00001e038783_P001 ERD15, LSR1,... Protein EARLY RESPONSIVE TO DEHYDRATION 15... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!