LOC_Os07g43870.3 (LOC_Os07g43870)


Aliases : LOC_Os07g43870

Description : no hits & (original description: none)


Gene families : OG0004662 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004662_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g43870.3

Target Alias Description ECC score Gene Family Method Actions
AT1G18700 No alias DNAJ heat shock N-terminal domain-containing protein 0.03 OrthoFinder output from all 47 species
Adi_g055448 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g29465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37602 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16093 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g15927 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g16484 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo419092 No alias No description available 0.02 OrthoFinder output from all 47 species
Smo430324 No alias No description available 0.03 OrthoFinder output from all 47 species
Spa_g13333 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g11494 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e010843_P001 Zm00001e010843 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006505 GPI anchor metabolic process IEP HCCA
BP GO:0006506 GPI anchor biosynthetic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!