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  5. LOC_Os07g41640.1

LOC_Os07g41640.1 (LOC_Os07g41640)


Aliases : LOC_Os07g41640

Description : no hits & (original description: none)


Gene families : OG0002660 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002660_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g41640.1
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00028p00081930 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT5G55600 No alias agenet domain-containing protein / bromo-adjacent... 0.02 OrthoFinder output from all 47 species
Adi_g019354 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058397 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g106373 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g110728 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g14231 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_20784 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003729 No alias not classified & original description: CDS=310-2703 0.02 OrthoFinder output from all 47 species
Solyc11g012620.2.1 Solyc11g012620 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e004156_P002 Zm00001e004156 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR008395 Agenet-like_dom 383 460
No external refs found!