LOC_Os07g40570.1 (WRKY4, LOC_Os07g40570)

Aliases : WRKY4, LOC_Os07g40570

Description : transcription factor (WRKY)

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os07g40570.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00110p00091490	ATWRKY57,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
Adi_g058124	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Adi_g058352	WRKY3	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Adi_g058461	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Adi_g117327	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g117757	AtWRKY20, WRKY20	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g61053	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene12756.t1	WRKY8, ATWRKY8,...	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0007.g010967	WRKY6, ATWRKY6	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Azfi_s0065.g035812	WRKY9, ATWRKY9	WRKY-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Azfi_s0115.g046297	WRKY4	WRKY-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Azfi_s0925.g092890	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: CDS=1-720	0.03	OrthoFinder output from all 47 species
Ceric.12G025600.1	AtWRKY20,...	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g34916	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g43124	WRKY3	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g09793	WRKY3	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01014854001	WRKY2, ATWRKY2	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
Gb_26412	WRKY28, ATWRKY28	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Lfl_g05639	WRKY4	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
MA_120969g0010	WRKY4	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Nbi_g06139	WRKY53, ATWRKY53	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g05849	WRKY43, ATWRKY43	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g63321	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000095	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: CDS=1-2088	0.05	OrthoFinder output from all 47 species
Sam_g40045	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g52309	No alias	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Solyc02g094270.2.1	WRKY75,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Solyc07g056280.3.1	ATWRKY71,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Solyc07g066220.3.1	WRKY2, ATWRKY2,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Spa_g30009	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e016623_P001	WRKY72,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Zm00001e017439_P001	AtWRKY47,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e021431_P001	WRKY75,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e024352_P003	WRKY2, ATWRKY2,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	339	395
IPR003657	WRKY_dom	170	226

External Links

No external refs found!

LOC_Os07g40570.1 (WRKY4, LOC_Os07g40570)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation