1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os07g31370.1

LOC_Os07g31370.1 (RAB6A, ATRABH1B,...)


Aliases : RAB6A, ATRABH1B, ATRAB6A, RAB6, LOC_Os07g31370

Description : H-class RAB GTPase


Gene families : OG0001773 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001773_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g31370.1

Target Alias Description ECC score Gene Family Method Actions
AT2G44610 RAB6A, ATRABH1B,... Ras-related small GTP-binding family protein 0.07 OrthoFinder output from all 47 species
Adi_g001484 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g02909 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07607 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.01G018400.1 AtRABH1e,... H-class RAB GTPase & original description:... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021464.53 AtRABH1e, RABH1e Vesicle trafficking.regulation of membrane tethering and... 0.01 OrthoFinder output from all 47 species
Cre01.g047550 RAB6A, ATRABH1B,... Vesicle trafficking.regulation of membrane tethering and... 0.05 OrthoFinder output from all 47 species
Dac_g08815 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07473 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g35885 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09589 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13691 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013222001 RAB6A, ATRABH1B,... Vesicle trafficking.regulation of membrane tethering and... 0.04 OrthoFinder output from all 47 species
GSVIVT01018361001 RAB6A, ATRABH1B,... Vesicle trafficking.regulation of membrane tethering and... 0.04 OrthoFinder output from all 47 species
Len_g58410 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04692 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g15790 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g21059 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05988 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.1 OrthoFinder output from all 47 species
Spa_g15125 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g01599 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e010425_P001 RAB6A, ATRABH1B,... H-class RAB GTPase 0.05 OrthoFinder output from all 47 species
Zm00001e035034_P001 RAB6A, ATRABH1B,... H-class RAB GTPase 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009555 pollen development IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 11 169
No external refs found!