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  5. LOC_Os06g51084.1

LOC_Os06g51084.1 (SBE2.2, LOC_Os06g51084)


Aliases : SBE2.2, LOC_Os06g51084

Description : starch branching enzyme


Gene families : OG0001102 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001102_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g51084.1
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Adi_g080095 SBE2.2 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Cre06.g289850 SBE2.2 Carbohydrate metabolism.starch... 0.02 OrthoFinder output from all 47 species
Cre10.g444700 SBE2.1, BE3 Carbohydrate metabolism.starch... 0.02 OrthoFinder output from all 47 species
Ehy_g12606 SBE2.2 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008673001 SBE2.1, BE3 Carbohydrate metabolism.starch... 0.01 OrthoFinder output from all 47 species
GSVIVT01033801001 SBE2.1, BE3 Carbohydrate metabolism.starch... 0.02 OrthoFinder output from all 47 species
Gb_33676 SBE2.2 starch branching enzyme 0.02 OrthoFinder output from all 47 species
MA_15024g0020 SBE2.2 1,4-alpha-glucan-branching enzyme 1,... 0.02 OrthoFinder output from all 47 species
Pnu_g10683 SBE2.2 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30829 SBE2.2 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g009190.4.1 SBE2.2, Solyc09g009190 starch branching enzyme 0.03 OrthoFinder output from all 47 species
Zm00001e013321_P002 SBE2.2, Zm00001e013321 starch branching enzyme 0.03 OrthoFinder output from all 47 species
Zm00001e014711_P001 SBE2.2, Zm00001e014711 starch branching enzyme 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0043169 cation binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR004193 Glyco_hydro_13_N 122 205
IPR006047 Glyco_hydro_13_cat_dom 293 366
IPR006048 A-amylase/branching_C 657 757
No external refs found!