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  5. LOC_Os06g48650.2

LOC_Os06g48650.2 (LOC_Os06g48650)


Aliases : LOC_Os06g48650

Description : protease (SBT2)


Gene families : OG0000027 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g48650.2
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00154570 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.serine-type... 0.04 OrthoFinder output from all 47 species
AMTR_s00129p00121180 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.serine-type... 0.04 OrthoFinder output from all 47 species
Adi_g021086 No alias protease *(SBT2) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g055415 ARA12 protease *(SBT1) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g21023 No alias protease *(SBT2) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10769 No alias protease *(SBT2) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g17102 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene03313.t1 SLP3, Aspi01Gene03313 protease *(SBT2) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000641 No alias not classified & original description: CDS=1-1959 0.02 OrthoFinder output from all 47 species
Azfi_s0005.g009483 No alias protease *(SBT2) & original description: CDS=248-2929 0.02 OrthoFinder output from all 47 species
Cba_g75890 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G062000.1 AIR3, Ceric.02G062000 protease *(SBT5) & original description: pacid=50585956... 0.03 OrthoFinder output from all 47 species
Dac_g15952 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07870 SLP3 protease *(SBT2) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14750 No alias protease *(SBT1) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016682001 No alias Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
MA_287999g0010 ARA12 Subtilisin-like protease SBT1.7 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Msp_g06815 No alias protease *(SBT1) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g31305 No alias protease *(SBT2) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g38275 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g18112 ARA12 protease *(SBT1) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18835 SLP3 protease *(SBT2) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12926 No alias protease *(SBT1) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10220 No alias protease *(SBT1) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006699 No alias not classified & original description: CDS=298-888 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008961 No alias not classified & original description: CDS=320-2542 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0119.g021298 No alias protease *(SBT2) & original description: CDS=1-2220 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0229.g026396 AIR3 not classified & original description: CDS=1-1875 0.04 OrthoFinder output from all 47 species
Smo96495 ATSBT5.4, SBT5.4 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
Solyc01g111400.4.1 SLP2, Solyc01g111400 protease (SBT1) 0.01 OrthoFinder output from all 47 species
Solyc02g030130.4.1 Solyc02g030130 protease (SBT2) 0.02 OrthoFinder output from all 47 species
Solyc02g069630.3.1 Solyc02g069630 protease (SBT2) 0.04 OrthoFinder output from all 47 species
Solyc07g041970.4.1 Solyc07g041970 protease (SBT1) 0.03 OrthoFinder output from all 47 species
Spa_g12820 No alias protease *(SBT2) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g43415 No alias protease *(SBT5) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04154 No alias protease *(SBT2) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10609 No alias protease *(SBT2) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e010225_P003 Zm00001e010225 protease (SBT3) 0.03 OrthoFinder output from all 47 species
Zm00001e013165_P003 SLP3, Zm00001e013165 protease (SBT2) 0.06 OrthoFinder output from all 47 species
Zm00001e019698_P001 Zm00001e019698 protease (SBT2) 0.06 OrthoFinder output from all 47 species
Zm00001e028977_P001 Zm00001e028977 protease (SBT2) 0.04 OrthoFinder output from all 47 species
Zm00001e030237_P001 Zm00001e030237 protease (SBT2) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP HCCA
BP GO:0000077 DNA damage checkpoint signaling IEP HCCA
CC GO:0000145 exocyst IEP HCCA
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0010948 negative regulation of cell cycle process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
CC GO:0030896 checkpoint clamp complex IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0031570 DNA integrity checkpoint signaling IEP HCCA
BP GO:0032259 methylation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
BP GO:0042770 signal transduction in response to DNA damage IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045786 negative regulation of cell cycle IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901988 negative regulation of cell cycle phase transition IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR000209 Peptidase_S8/S53_dom 154 644
IPR010259 S8pro/Inhibitor_I9 24 126
IPR041469 Subtilisin-like_FN3 722 815
No external refs found!