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  5. LOC_Os06g47940.1

LOC_Os06g47940.1 (ATCNFU3, NFU3, LOC_Os06g47940)


Aliases : ATCNFU3, NFU3, LOC_Os06g47940

Description : scaffold protein NFU of plastidial SUF system transfer phase


Gene families : OG0003751 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003751_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g47940.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00236430 ATCNFU3, NFU3,... Coenzyme metabolism.iron-sulfur cluster assembly... 0.05 OrthoFinder output from all 47 species
Adi_g007224 NFU2, ATCNFU2 scaffold protein NFU of plastidial SUF system transfer... 0.02 OrthoFinder output from all 47 species
Als_g09300 NFU2, ATCNFU2 scaffold protein NFU of plastidial SUF system transfer... 0.12 OrthoFinder output from all 47 species
Cba_g10376 NFU2, ATCNFU2 scaffold protein NFU of plastidial SUF system transfer... 0.02 OrthoFinder output from all 47 species
Cba_g48821 NFU2, ATCNFU2 scaffold protein NFU of plastidial SUF system transfer... 0.02 OrthoFinder output from all 47 species
Ceric.10G025000.1 NFU2, ATCNFU2,... scaffold protein NFU of plastidial SUF system transfer... 0.03 OrthoFinder output from all 47 species
Dcu_g05186 NFU2, ATCNFU2 scaffold protein NFU of plastidial SUF system transfer... 0.07 OrthoFinder output from all 47 species
Dde_g48924 NFU2, ATCNFU2 scaffold protein NFU of plastidial SUF system transfer... 0.02 OrthoFinder output from all 47 species
Ehy_g27738 NFU2, ATCNFU2 scaffold protein NFU of plastidial SUF system transfer... 0.02 OrthoFinder output from all 47 species
Gb_40179 NFU2, ATCNFU2 scaffold protein NFU of plastidial SUF system transfer phase 0.04 OrthoFinder output from all 47 species
Nbi_g08868 NFU2, ATCNFU2 scaffold protein NFU of plastidial SUF system transfer... 0.04 OrthoFinder output from all 47 species
Ore_g08081 NFU2, ATCNFU2 scaffold protein NFU of plastidial SUF system transfer... 0.04 OrthoFinder output from all 47 species
Pir_g11640 NFU2, ATCNFU2 scaffold protein NFU of plastidial SUF system transfer... 0.04 OrthoFinder output from all 47 species
Ppi_g52825 NFU2, ATCNFU2 scaffold protein NFU of plastidial SUF system transfer... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0143.g022872 NFU2, ATCNFU2 scaffold protein NFU of plastidial SUF system transfer... 0.02 OrthoFinder output from all 47 species
Sam_g15028 No alias scaffold protein NFU of plastidial SUF system transfer... 0.02 OrthoFinder output from all 47 species
Sam_g24035 No alias scaffold protein NFU of plastidial SUF system transfer... 0.04 OrthoFinder output from all 47 species
Smo230831 NFU2, ATCNFU2 Coenzyme metabolism.iron-sulfur cluster assembly... 0.03 OrthoFinder output from all 47 species
Solyc05g044630.3.1 ATCNFU3, NFU3,... scaffold protein NFU of plastidial SUF system transfer phase 0.06 OrthoFinder output from all 47 species
Tin_g16769 NFU2, ATCNFU2 scaffold protein NFU of plastidial SUF system transfer... 0.03 OrthoFinder output from all 47 species
Zm00001e030263_P002 ATCNFU3, NFU3,... scaffold protein NFU of plastidial SUF system transfer phase 0.19 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA Interproscan
BP GO:0016226 iron-sulfur cluster assembly IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001075 NIF_FeS_clus_asmbl_NifU_C 154 216
IPR001075 NIF_FeS_clus_asmbl_NifU_C 73 138
No external refs found!