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  5. LOC_Os06g44220.1

LOC_Os06g44220.1 (LOC_Os06g44220)


Aliases : LOC_Os06g44220

Description : no hits & (original description: none)


Gene families : OG0001355 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001355_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g44220.1
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
AT2G24040 No alias Low temperature and salt responsive protein family 0.02 OrthoFinder output from all 47 species
AT4G28088 No alias Low temperature and salt responsive protein family 0.04 OrthoFinder output from all 47 species
Gb_22722 No alias Hydrophobic protein RCI2A OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_22723 No alias Hydrophobic protein RCI2A OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_12178g0010 RCI2A no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_30375g0010 RCI2A no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0119.g021294 No alias not classified & original description: CDS=457-624 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000612 PMP3 10 57
No external refs found!